RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TGOLN2O43493 480 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 UPK1BO75841 260 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 RPP14O95059 124 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 UBL3O95164 117 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 HLA-AP01891 365 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 RLN2P04090 185 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TFF1P04155 84 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 CD74P04233 296 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 HSPB1P04792 205 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TYMSP04818 313 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SNRPAP09012 282 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 IFI6P09912 130 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 P0C879 139 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 G0S2P27469 103 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 APLNRP35414 380 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 GDI2P50395 445 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SERPINB9P50453 376 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 KRTAP10-8P60410 259 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 PSG7Q13046 419 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 KLRD1Q13241 179 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 HERPUD1Q15011 391 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TBC1D28Q2M2D7 210 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TTC32Q5I0X7 151 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 PABPC1L2AQ5JQF8 200 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SYT6Q5T7P8 510 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 ZFAND6Q6FIF0 208 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 LRRN1Q6UXK5 716 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 FBXW12Q6X9E4 464 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 RNF165Q6ZSG1 346 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 S100A7AQ86SG5 101 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 RIMKLAQ8IXN7 391 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 LGI3Q8N145 548 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 C10orf111Q8N326 155 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SPICQ8N5J4 248 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 OR5L1Q8NGL2 311 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 OR52P1PQ8NH57 321 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 OR4S2Q8NH73 311 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 MFSD8Q8NHS3 518 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 KLF14Q8TD94 323 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TWIST2Q8WVJ9 160 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SLC7A6Q92536 515 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 PTH2Q96A98 100 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 RBMXL1Q96E39 390 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 PHYHIPLQ96FC7 376 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 GALNT14Q96FL9 552 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TEX37Q96LM6 180 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 KCTD7Q96MP8 289 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SPACA5Q96QH8 159 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 RBP7Q96R05 134 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 OR2V2Q96R30 315 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 METTL26Q96S19 204 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 WFDC6Q9BQY6 131 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SULT4A1Q9BR01 284 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 MRPS26Q9BYN8 205 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TMEM27Q9HBJ8 222 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 HRASLSQ9HDD0 168 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 MED4Q9NPJ6 270 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 TMEM38BQ9NVV0 291 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 FAM206AQ9NX38 181 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 MARCOQ9UEW3 520 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 SLC7A11Q9UPY5 501 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 PSG8Q9UQ74 426 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 UTP11Q9Y3A2 253 aaKnown RBP2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 RYR2Q92736 4967 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 BIRC6Q9NR09 4857 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 HYDINQ4G0P3 5121 aa2.26□□□□□ -2.05
HMGB1P6-201ENST00000569046 IGKV1D-42A0A075B6H8 117 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 IGHV3OR15-7A0A075B7D8 119 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 A0A087WUJ7 227 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 IGKV1D-43A0A0B4J1Z2 117 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 TRAV8-6A0A0B4J262 113 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 IGHV1-69DA0A0B4J2H0 117 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 EXOC1LA0A1B0GW35 172 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 DAPL1A0PJW8 107 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 F5H5P2 479 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 PEX7O00628 323 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 KPNA4O00629 521 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 TPST1O60507 370 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 NPIPB7O75200 414 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 ENTPD6O75354 484 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 GABARAPO95166 117 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 IGHV1-69P01742 117 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 BGLAPP02818 100 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 OPN1SWP03999 348 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 HLA-DPB1P04440 258 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 DBIP07108 87 aaKnown RBP2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 MMP7P09237 267 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 CTXN2P0C2S0 81 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 ZNF32P17041 273 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 RCC1P18754 421 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 CELP19835 753 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 RAB3AP20336 220 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 M6PRP20645 277 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 FKBP2P26885 142 aaKnown RBP2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 TALDO1P37837 337 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 PMELP40967 661 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 RAB13P51153 203 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 COPZ1P61923 177 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 HPCAP84074 193 aa2.25□□□□□ -2.05
HMGB1P6-201ENST00000569046 PSG4Q00888 419 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms