RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-224ENST00000568877 CACNG5Q9UF02 275 aa13.11□□□□□ -0.31
COMMD4-224ENST00000568877 ZNF257Q9Y2Q1 563 aa13.11□□□□□ -0.31
COMMD4-224ENST00000568877 TMED3Q9Y3Q3 217 aa13.11□□□□□ -0.31
COMMD4-224ENST00000568877 COL6A5A8TX70 2615 aa13.11□□□□□ -0.31
COMMD4-224ENST00000568877 SOX15O60248 233 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 DHFRP00374 187 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 ELANEP08246 267 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 HOXB5P09067 269 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
COMMD4-224ENST00000568877 FOXE3Q13461 319 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 SHISA2Q6UWI4 295 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 SPATA3Q8NHX4 192 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 SRSF8Q9BRL6 282 aaKnown RBP13.1□□□□□ -0.31
COMMD4-224ENST00000568877 HINT2Q9BX68 163 aa13.1□□□□□ -0.31
COMMD4-224ENST00000568877 PLXNB1O43157 2135 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 PRAF2O60831 178 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 SULT1A3P0DMM9 295 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 SULT1A4P0DMN0 295 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 PSMB8P28062 276 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 CD83Q01151 205 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 RGS21Q2M5E4 152 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 AARDQ4LEZ3 155 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 OR10W1Q8NGF6 305 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 FAM110DQ8TAY7 271 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-224ENST00000568877 CITED2Q99967 270 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-224ENST00000568877 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 GPN1Q9HCN4 374 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-224ENST00000568877 COA4Q9NYJ1 87 aa13.09□□□□□ -0.31
COMMD4-224ENST00000568877 A0A1B0GU03 582 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 TCRBV4S1A1TA0A5B7 111 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 IGLC7A0M8Q6 106 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 ADAP1O75689 374 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 IFNA17P01571 189 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 PF4V1P10720 104 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 AREGP15514 252 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 PRCDQ00LT1 54 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 SMCO1Q147U7 214 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-224ENST00000568877 GGNBP1Q5YKI7 109 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 HIST2H2BDQ6DRA6 164 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 HSD17B13Q7Z5P4 300 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-224ENST00000568877 RNF152Q8N8N0 203 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 KLK15Q9H2R5 256 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 TENM1Q9UKZ4 2725 aa13.08□□□□□ -0.32
COMMD4-224ENST00000568877 SNRPGP15A8MWD9 76 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 H3BUA1 57 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 IFNA21P01568 189 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 RPLP1P05386 114 aaKnown RBP13.07□□□□□ -0.32
COMMD4-224ENST00000568877 CRYGCP07315 174 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 SLC25A6P12236 298 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 PSMB6P28072 239 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 RAB9AP51151 201 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 LCNL1Q6ZST4 164 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-224ENST00000568877 OR52E5Q8NH55 327 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 ZNF355PQ9NSJ1 428 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 CACFD1Q9UGQ2 172 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 TNCP24821 2201 aa13.07□□□□□ -0.32
COMMD4-224ENST00000568877 BRI3O95415 125 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 REG1AP05451 166 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 OR13C7P0DN81 318 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 CTRB1P17538 263 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 SPCS3P61009 180 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 WT1-ASQ06250 92 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 CTRB2Q6GPI1 263 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 MRPL41Q8IXM3 137 aaKnown RBP13.06□□□□□ -0.32
COMMD4-224ENST00000568877 UXS1Q8NBZ7 420 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 OR1S1Q8NH92 325 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 MS4A10Q96PG2 267 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 SLA2Q9H6Q3 261 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 PLEKHA3Q9HB20 300 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 ZFP57Q9NU63 452 aa13.06□□□□□ -0.32
COMMD4-224ENST00000568877 TSSC4Q9Y5U2 329 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-224ENST00000568877 PITX3O75364 302 aa13.05□□□□□ -0.32
COMMD4-224ENST00000568877 TRGV3P03979 118 aa13.05□□□□□ -0.32
COMMD4-224ENST00000568877 PDLIM3Q53GG5 364 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-224ENST00000568877 SPINK9Q5DT21 86 aa13.05□□□□□ -0.32
COMMD4-224ENST00000568877 KHDC1LQ5JSQ8 128 aa13.05□□□□□ -0.32
COMMD4-224ENST00000568877 NDUFA11Q86Y39 141 aa13.05□□□□□ -0.32
COMMD4-224ENST00000568877 MYOZ3Q8TDC0 251 aa13.05□□□□□ -0.32
COMMD4-224ENST00000568877 MPTX1A8MV57 137 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 INS-IGF2F8WCM5 200 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 NXPH3O95157 252 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 PRH1P02810 166 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 DEFA4P12838 97 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 TPPP2P59282 170 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 RPL23AP62750 156 aaKnown RBP13.04□□□□□ -0.32
COMMD4-224ENST00000568877 ERHP84090 104 aaKnown RBP13.04□□□□□ -0.32
COMMD4-224ENST00000568877 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
COMMD4-224ENST00000568877 C19orf35Q6ZS72 473 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 HSPB7Q9UBY9 170 aa13.04□□□□□ -0.32
COMMD4-224ENST00000568877 ADARB2-AS1A8MUL3 147 aa13.03□□□□□ -0.32
COMMD4-224ENST00000568877 CDX1P47902 265 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-224ENST00000568877 HOXA1P49639 335 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-224ENST00000568877 TNFRSF9Q07011 255 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms