RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ASPHD1Q5U4P2 390 aa9.51□□□□□ -0.89
SF3B3-208ENST00000567250 SLC35G3Q8N808 338 aa9.51□□□□□ -0.89
SF3B3-208ENST00000567250 MYOZ3Q8TDC0 251 aa9.51□□□□□ -0.89
SF3B3-208ENST00000567250 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
SF3B3-208ENST00000567250 SHPKQ9UHJ6 478 aa9.51□□□□□ -0.89
SF3B3-208ENST00000567250 TBC1D24Q9ULP9 559 aa9.51□□□□□ -0.89
SF3B3-208ENST00000567250 SOX15O60248 233 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 SFT2D2O95562 160 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 TRGV3P03979 118 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 TCRBP04435 133 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 P0C879 139 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 HIST1H1BP16401 226 aaKnown RBP9.5□□□□□ -0.89
SF3B3-208ENST00000567250 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 C4orf46Q504U0 113 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 PRR31Q5SQ13 230 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 SELENOHQ8IZQ5 122 aaKnown RBP9.5□□□□□ -0.89
SF3B3-208ENST00000567250 TTC9CQ8N5M4 171 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 LRTM2Q8N967 370 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 OR5T1Q8NG75 326 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 COQ8AQ8NI60 647 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 LHFPL5Q8TAF8 219 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 CASTOR1Q8WTX7 329 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 C4orf3Q8WVX3 66 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 HINT2Q9BX68 163 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 NUDT15Q9NV35 164 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 NSG2Q9Y328 171 aa9.5□□□□□ -0.89
SF3B3-208ENST00000567250 TEX50A0A1B0GTY4 177 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 HMX3A6NHT5 357 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 FAM223BA6NKX1 122 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 PF4P02776 101 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 OR4E1P0C645 316 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 DEFA4P12838 97 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 PSMB6P28072 239 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 PRCDQ00LT1 54 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 LCNL1Q6ZST4 164 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 LYG2Q86SG7 212 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 FAM223AQ8IWN6 122 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 ZNF491Q8N8L2 437 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 USMG5Q96IX5 58 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 ALX4Q9H161 411 aaPredicted RBP9.49□□□□□ -0.89
SF3B3-208ENST00000567250 PLEKHA3Q9HB20 300 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 NDUFA4L2Q9NRX3 87 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 THYN1Q9P016 225 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 FLVCR2Q9UPI3 526 aa9.49□□□□□ -0.89
SF3B3-208ENST00000567250 TRAV6A0A075B6T7 132 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 A0A0G2JRQ6 117 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 C13orf42A0A1B0GVH6 325 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 IGLC7A0M8Q6 106 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 C9orf170A2RU37 121 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 ADARB2-AS1A8MUL3 147 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 E7EUB6 86 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 DUS4LO95620 317 aaKnown RBP9.48□□□□□ -0.89
SF3B3-208ENST00000567250 IFNA17P01571 189 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 CRYGCP07315 174 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 LGALS1P09382 135 aaKnown RBP9.48□□□□□ -0.89
SF3B3-208ENST00000567250 SULT1A3P0DMM9 295 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 SULT1A4P0DMN0 295 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 MYOD1P15172 320 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 AREGP15514 252 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 CTRB1P17538 263 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 ANXA7P20073 488 aaKnown RBP9.48□□□□□ -0.89
SF3B3-208ENST00000567250 HSPE1P61604 102 aaKnown RBP9.48□□□□□ -0.89
SF3B3-208ENST00000567250 DHRS2Q13268 280 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 CTRB2Q6GPI1 263 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 OR1L6Q8NGR2 347 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 MS4A10Q96PG2 267 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 KLK15Q9H2R5 256 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 PALMDQ9NP74 551 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 ENY2Q9NPA8 101 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-208ENST00000567250 CACNG5Q9UF02 275 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 TMED3Q9Y3Q3 217 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 DNHD1Q96M86 4753 aa9.48□□□□□ -0.89
SF3B3-208ENST00000567250 A0A1B0GW64 132 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 CGB1A6NKQ9 187 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 ST8SIA3O43173 380 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 TSPAN15O95858 294 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 H2AFB2P0C5Z0 115 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 OR13C7P0DN81 318 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 HOXA1P49639 335 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-208ENST00000567250 ERHP84090 104 aaKnown RBP9.47□□□□□ -0.89
SF3B3-208ENST00000567250 RUNX1Q01196 453 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 IFITM3Q01628 133 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 AARDQ4LEZ3 155 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 NMSQ5H8A3 153 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 HIST2H2BDQ6DRA6 164 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 PLET1Q6UQ28 207 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 NECAP1Q8NC96 275 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 OR52E5Q8NH55 327 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 PRR13Q9NZ81 148 aa9.47□□□□□ -0.89
SF3B3-208ENST00000567250 VWFP04275 2813 aa9.46□□□□□ -0.89
SF3B3-208ENST00000567250 A0A0B4J293 547 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 A0A1B0GU03 582 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 DBX1A6NMT0 343 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 IFNA21P01568 189 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 REG1AP05451 166 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 SLC25A6P12236 298 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms