RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 ACACAQ13085 2346 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 PLCE1Q9P212 2302 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 HMGB3O15347 200 aaKnown RBP10.91□□□□□ -0.66
LINC00563-201ENST00000566370 S100A8P05109 93 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 S100A9P06702 114 aaKnown RBP10.91□□□□□ -0.66
LINC00563-201ENST00000566370 TAS2R45P59539 299 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 CD81P60033 236 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 HABP2Q14520 560 aaPredicted RBP10.91□□□□□ -0.66
LINC00563-201ENST00000566370 BSXQ3C1V8 233 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 WDR25Q64LD2 544 aaPredicted RBP10.91□□□□□ -0.66
LINC00563-201ENST00000566370 TMEM144Q7Z5S9 345 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 NEUROG1Q92886 237 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 ANAPC16Q96DE5 110 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 UHRF2Q96PU4 802 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 SLC45A2Q9UMX9 530 aa10.91□□□□□ -0.66
LINC00563-201ENST00000566370 LSM4Q9Y4Z0 139 aaKnown RBP10.91□□□□□ -0.66
LINC00563-201ENST00000566370 APC2O95996 2303 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 ATXN7O15265 892 aaPredicted RBP10.9□□□□□ -0.66
LINC00563-201ENST00000566370 CLN5O75503 358 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 STAG3L2P0CL84 134 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 STAG3L3P0CL85 134 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 GPX4P36969 197 aaPredicted RBP10.9□□□□□ -0.66
LINC00563-201ENST00000566370 HLA-DRB5Q30154 266 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 CST9LP1Q5W188 147 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 MIC13Q5XKP0 118 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
LINC00563-201ENST00000566370 PARLQ9H300 379 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 TMPRSS5Q9H3S3 457 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 CTSZQ9UBR2 303 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 ARL2-SNX15V9GYD0 113 aa10.9□□□□□ -0.66
LINC00563-201ENST00000566370 YLPM1P49750 1951 aaKnown RBP10.89□□□□□ -0.67
LINC00563-201ENST00000566370 RP1L1Q8IWN7 2480 aaPredicted RBP10.89□□□□□ -0.67
LINC00563-201ENST00000566370 H7BYZ3 331 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 PPP1R2P9O14990 202 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 ACTL6BO94805 426 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 IGKV1-16P04430 117 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 RND2P52198 227 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 DLX6P56179 175 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 ELOBQ15370 118 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 ARSJQ5FYB0 599 aaPredicted RBP10.89□□□□□ -0.67
LINC00563-201ENST00000566370 ETFRF1Q6IPR1 90 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 KCNIP4Q6PIL6 250 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 SPNS3Q6ZMD2 512 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 STPG3Q8N7X2 389 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 NEU4Q8WWR8 484 aaPredicted RBP10.89□□□□□ -0.67
LINC00563-201ENST00000566370 C22orf15Q8WYQ4 148 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 CLEC7AQ9BXN2 247 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 TMEM167BQ9NRX6 74 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 DOCK11Q5JSL3 2073 aa10.89□□□□□ -0.67
LINC00563-201ENST00000566370 YIF1AO95070 293 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 RPL35P42766 123 aaKnown RBP10.88□□□□□ -0.67
LINC00563-201ENST00000566370 ERVFRD-1P60508 538 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 UTF1Q5T230 341 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 MMD2Q8IY49 270 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 TEX45Q8NA69 505 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 SSMEM1Q8WWF3 244 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 CHODLQ9H9P2 273 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 PATZ1Q9HBE1 687 aaKnown RBP10.88□□□□□ -0.67
LINC00563-201ENST00000566370 NDUFA4L2Q9NRX3 87 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 CBLN4Q9NTU7 201 aa10.88□□□□□ -0.67
LINC00563-201ENST00000566370 TECRQ9NZ01 308 aaKnown RBP10.88□□□□□ -0.67
LINC00563-201ENST00000566370 METTL1Q9UBP6 276 aaKnown RBP10.88□□□□□ -0.67
LINC00563-201ENST00000566370 PTPRZ1P23471 2315 aaPredicted RBP10.87□□□□□ -0.67
LINC00563-201ENST00000566370 AP4M1O00189 453 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 ENSAO43768 121 aaKnown RBP10.87□□□□□ -0.67
LINC00563-201ENST00000566370 IGHV2-70P01814 119 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 ARL14EPLP0DKL9 152 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
LINC00563-201ENST00000566370 REG1BP48304 166 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 CD69Q07108 199 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 KIAA0141Q14154 515 aaPredicted RBP10.87□□□□□ -0.67
LINC00563-201ENST00000566370 SSX2Q16385 188 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 SLC16A13Q7RTY0 426 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 PNKDQ8N490 385 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 Q8N7P7 452 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 Q8WTZ3 238 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 TMEM170AQ8WVE7 144 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 ST6GALNAC6Q969X2 333 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 FAM210BQ96KR6 192 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 YPEL4Q96NS1 127 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 MRPL32Q9BYC8 188 aaKnown RBP10.87□□□□□ -0.67
LINC00563-201ENST00000566370 DOK5Q9P104 306 aa10.87□□□□□ -0.67
LINC00563-201ENST00000566370 ANKRD11Q6UB99 2663 aaPredicted RBP10.87□□□□□ -0.67
LINC00563-201ENST00000566370 TRBV24-1A0A075B6N3 115 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 PPIAL4CA0A0B4J2A2 164 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 SRRM4A7MD48 611 aaKnown RBP10.86□□□□□ -0.67
LINC00563-201ENST00000566370 UBE2CO00762 179 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 LIPFP07098 398 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 PPIAL4GP0DN37 164 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 CD99P14209 185 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 IGFBP2P18065 325 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 GCHFRP30047 84 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 COMPP49747 757 aaPredicted RBP10.86□□□□□ -0.67
LINC00563-201ENST00000566370 BPIFB3P59826 476 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 SNRPEP62304 92 aaKnown RBP10.86□□□□□ -0.67
LINC00563-201ENST00000566370 RPL23P62829 140 aaKnown RBP10.86□□□□□ -0.67
LINC00563-201ENST00000566370 OR1L4Q8NGR5 311 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 C8orf46Q8TAG6 207 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms