RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 TRUB1Q8WWH5 349 aaKnown RBP5.98□□□□□ -1.45
SMPD3-206ENST00000566009 CIB1Q99828 191 aa5.98□□□□□ -1.45
SMPD3-206ENST00000566009 GABARAPL1Q9H0R8 117 aa5.98□□□□□ -1.45
SMPD3-206ENST00000566009 MSRB1Q9NZV6 116 aa5.98□□□□□ -1.45
SMPD3-206ENST00000566009 WARS2Q9UGM6 360 aaKnown RBP5.98□□□□□ -1.45
SMPD3-206ENST00000566009 IGHV3-21A0A0B4J1V1 117 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 A0A0J9YY99 117 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 CTSGP08311 255 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 OR2T7P0C7T2 308 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 ATP6V1E1P36543 226 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 TMED1Q13445 227 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 OR5I1Q13606 314 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 TPBGQ13641 420 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 ACOT6Q3I5F7 207 aaPredicted RBP5.97□□□□□ -1.45
SMPD3-206ENST00000566009 TP53I3Q53FA7 332 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 PSMG4Q5JS54 123 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 SIGIRRQ6IA17 410 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 GID4Q8IVV7 300 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 SVOPQ8N4V2 548 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 UBAC2Q8NBM4 344 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 OR8J1Q8NGP2 316 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 DCANP1Q8TF63 244 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 PYDC1Q8WXC3 89 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 ATP6V0BQ99437 205 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 UQCC2Q9BRT2 126 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 OR51E2Q9H255 320 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 SDHAF2Q9NX18 166 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 C21orf62Q9NYP8 219 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 GNG8Q9UK08 70 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 OAZ3Q9UMX2 235 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 GOLT1BQ9Y3E0 138 aa5.97□□□□□ -1.45
SMPD3-206ENST00000566009 SAC3D1A6NKF1 404 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 CGB1A6NKQ9 187 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 M0R129 80 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 M6PRP20645 277 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 HOXA5P20719 270 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 RELQ04864 619 aaPredicted RBP5.96□□□□□ -1.46
SMPD3-206ENST00000566009 ZFP1Q6P2D0 407 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 FAM220AQ7Z4H9 259 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 OR6M1Q8NGM8 313 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 GLMPQ8WWB7 406 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 RFKQ969G6 155 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 Q96M66 194 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 C7orf50Q9BRJ6 194 aaKnown RBP5.96□□□□□ -1.46
SMPD3-206ENST00000566009 DPH3P1Q9H4G8 78 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 RIBC2Q9H4K1 309 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 ORC6Q9Y5N6 252 aa5.96□□□□□ -1.46
SMPD3-206ENST00000566009 TRAV9-2A0A087WT02 112 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 MARCH11A6NNE9 402 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 PANO1I0J062 215 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 PSCAO43653 123 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 NXPH4O95158 308 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 ATP6V1G2O95670 118 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 IGKV3-20P01619 116 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 ALPLP05186 524 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 ZNF93P35789 620 aaPredicted RBP5.95□□□□□ -1.46
SMPD3-206ENST00000566009 HOXA1P49639 335 aaPredicted RBP5.95□□□□□ -1.46
SMPD3-206ENST00000566009 GPR176Q14439 515 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 ZIK1Q3SY52 487 aaPredicted RBP5.95□□□□□ -1.46
SMPD3-206ENST00000566009 Q56UQ5 140 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 YIF1BQ5BJH7 314 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 FDX2Q6P4F2 183 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 VKORC1L1Q8N0U8 176 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 CADM3Q8N126 398 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 OR4C16Q8NGL9 310 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 SCARB1Q8WTV0 552 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 C5orf30Q96GV9 206 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 GABARAPL3Q9BY60 117 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 CACNG5Q9UF02 275 aa5.95□□□□□ -1.46
SMPD3-206ENST00000566009 SNTNA6NMZ2 147 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 OR4C45A6NMZ5 311 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 RAB27BO00194 218 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 NAPSAO96009 420 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 IGLV2-11P01706 119 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 PRM2P04554 102 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 LINC01620Q4KN68 170 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 MEDAGQ5VYS4 303 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 SLC25A24Q6NUK1 477 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 ZNF880Q6PDB4 577 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 SETD6Q8TBK2 473 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 RBPMSQ93062 196 aaKnown RBP5.94□□□□□ -1.46
SMPD3-206ENST00000566009 LINC01600Q96MT4 127 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 GINS3Q9BRX5 216 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 DCUN1D5Q9BTE7 237 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 BANF2Q9H503 90 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 S100A14Q9HCY8 104 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 IMPAD1Q9NX62 359 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 TAS2R4Q9NYW5 299 aa5.94□□□□□ -1.46
SMPD3-206ENST00000566009 EXOGQ9Y2C4 368 aaKnown RBP5.94□□□□□ -1.46
SMPD3-206ENST00000566009 DAPL1A0PJW8 107 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 HELTA6NFD8 242 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 EI24O14681 340 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 PDCD6O75340 191 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 KBTBD11O94819 623 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 HTR1AP08908 422 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 HLA-DRB4P13762 266 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 ZNF85Q03923 595 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 ASAH1Q13510 395 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 ARFRP1Q13795 201 aa5.93□□□□□ -1.46
SMPD3-206ENST00000566009 ZNF709Q8N972 641 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms