RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MRGPRG-AS1Q2M3A8 158 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 ABHD5Q8WTS1 349 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 PRSS22Q9GZN4 317 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 HSPB7Q9UBY9 170 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 KCNAB3O43448 404 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 PFDN1O60925 122 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 LY86O95711 162 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 MBPP02686 304 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-208ENST00000564247 AMY1AP04745 511 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 S100A10P60903 97 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 IL15RAQ13261 267 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 PPP1R1CQ8WVI7 109 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 ARPC1AQ92747 370 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 ZNF747Q9BV97 191 aa13.41□□□□□ -0.26
CMTM3-208ENST00000564247 RANGRFQ9HD47 186 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-208ENST00000564247 LSM5Q9Y4Y9 91 aaKnown RBP13.41□□□□□ -0.26
CMTM3-208ENST00000564247 TET2Q6N021 2002 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 IGHV7-81A0A0B4J1V7 117 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 A0A1W2PN81 502 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 SYNGR2O43760 224 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 PET100P0DJ07 73 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 MYOD1P15172 320 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 PVALBP20472 110 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 CHRNA7P36544 502 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 POLR2GP62487 172 aaKnown RBP eCLIP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 BLCAPP62952 87 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 ERHP84090 104 aaKnown RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 PRCDQ00LT1 54 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 RAB32Q13637 225 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 LRRC37A5PQ49AS3 106 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 PDLIM3Q53GG5 364 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 ARSJQ5FYB0 599 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 OR2T35Q8NGX2 323 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 SRSF12Q8WXF0 261 aaKnown RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 TAF15Q92804 592 aaKnown RBP eCLIP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 CIB3Q96Q77 187 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 MAGT1Q9H0U3 335 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 HIPK2Q9H2X6 1198 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 RBKSQ9H477 322 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 PLEKHA3Q9HB20 300 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 HEYLQ9NQ87 328 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-208ENST00000564247 NDUFA4L2Q9NRX3 87 aa13.4□□□□□ -0.26
CMTM3-208ENST00000564247 MSGN1A6NI15 193 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 SH2D7A6NKC9 451 aaPredicted RBP13.39□□□□□ -0.27
CMTM3-208ENST00000564247 K7EPK0 472 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 L7N2F9 121 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 NDUFA7O95182 113 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 HOXA1P49639 335 aaPredicted RBP13.39□□□□□ -0.27
CMTM3-208ENST00000564247 VAMP2P63027 116 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 TMEM267Q0VDI3 215 aaPredicted RBP13.39□□□□□ -0.27
CMTM3-208ENST00000564247 SPINK9Q5DT21 86 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 HSD17B13Q7Z5P4 300 aaPredicted RBP13.39□□□□□ -0.27
CMTM3-208ENST00000564247 SLC35E3Q7Z769 313 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 GRPEL2Q8TAA5 225 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 THAP6Q8TBB0 222 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 WDR89Q96FK6 387 aaPredicted RBP13.39□□□□□ -0.27
CMTM3-208ENST00000564247 RAB40CQ96S21 281 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
CMTM3-208ENST00000564247 PARP11Q9NR21 331 aa13.39□□□□□ -0.27
CMTM3-208ENST00000564247 A0A1B0GUS0 222 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 MPC2O95563 127 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 IGHG2P01859 326 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 MDKP21741 143 aaPredicted RBP13.38□□□□□ -0.27
CMTM3-208ENST00000564247 SHISA2Q6UWI4 295 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 OR4F5Q8NH21 305 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 DTD1Q8TEA8 209 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 ST6GAL2Q96JF0 529 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 HSPB9Q9BQS6 159 aa13.38□□□□□ -0.27
CMTM3-208ENST00000564247 RCL1Q9Y2P8 373 aaKnown RBP13.38□□□□□ -0.27
CMTM3-208ENST00000564247 E7EUB6 86 aa13.37□□□□□ -0.27
CMTM3-208ENST00000564247 SSSCA1O60232 199 aa13.37□□□□□ -0.27
CMTM3-208ENST00000564247 RPL23AP62750 156 aaKnown RBP13.37□□□□□ -0.27
CMTM3-208ENST00000564247 RPP30P78346 268 aaKnown RBP13.37□□□□□ -0.27
CMTM3-208ENST00000564247 TCTE3Q8IZS6 198 aa13.37□□□□□ -0.27
CMTM3-208ENST00000564247 TMEM68Q96MH6 324 aa13.37□□□□□ -0.27
CMTM3-208ENST00000564247 E5RGE8 158 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 DEDDO75618 318 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 OR13C7P0DN81 318 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 IAPPP10997 89 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 SNCAP37840 140 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 SSBP2P81877 361 aaPredicted RBP13.36□□□□□ -0.27
CMTM3-208ENST00000564247 PRSS54Q6PEW0 395 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 OR10W1Q8NGF6 305 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 SGMS2Q8NHU3 365 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 SMIM8Q96KF7 97 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 FAM103A1Q9BTL3 118 aaKnown RBP13.36□□□□□ -0.27
CMTM3-208ENST00000564247 NBEAL1Q6ZS30 2694 aa13.36□□□□□ -0.27
CMTM3-208ENST00000564247 CGB1A6NKQ9 187 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 INS-IGF2F8WCM5 200 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 AP4M1O00189 453 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 ATP6V0E1O15342 81 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 VDAC2P45880 294 aaPredicted RBP13.35□□□□□ -0.27
CMTM3-208ENST00000564247 SUB1P53999 127 aaKnown RBP eCLIP13.35□□□□□ -0.27
CMTM3-208ENST00000564247 TAS2R30P59541 319 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 AKIRIN2Q53H80 203 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 C11orf87Q6NUJ2 197 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 NOXA1Q86UR1 476 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms