RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 SCP2D1Q9UJQ7 156 aa8.26□□□□□ -1.09
TPM1-227ENST00000560970 TRAV3A0A0B4J244 114 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 E7EUB6 86 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 BOLA2-SMG1P6H3BVE0 249 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 CCNKO75909 580 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 OR2A4O95047 310 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 CNIH1O95406 144 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 IL5P05113 134 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 PGAM2P15259 253 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 RPA2P15927 270 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 PI3P19957 117 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 RAB9AP51151 201 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 RRAS2P62070 204 aaPredicted RBP8.25□□□□□ -1.09
TPM1-227ENST00000560970 ZNF585BQ52M93 769 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 AKIRIN2Q53H80 203 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 TBC1D26Q86UD7 250 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 SLC38A6Q8IZM9 456 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 ARRDC1Q8N5I2 433 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 TMEM167AQ8TBQ9 72 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
TPM1-227ENST00000560970 DLX4Q92988 240 aaPredicted RBP8.25□□□□□ -1.09
TPM1-227ENST00000560970 RHOVQ96L33 236 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 OR2A7Q96R45 310 aa8.25□□□□□ -1.09
TPM1-227ENST00000560970 ALX4Q9H161 411 aaPredicted RBP8.25□□□□□ -1.09
TPM1-227ENST00000560970 IGHV4OR15-8A0A075B7B6 117 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 A0A087WW49 117 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 CGB1A6NKQ9 187 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 TEX22C9J3V5 150 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 HPRT1P00492 218 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 IGKV1-39P01597 117 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 IGKV1D-39P04432 117 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 IFNA6P05013 189 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 TAS2R31P59538 309 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 POU2AF1Q16633 256 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 SCGB2B2Q4G0G5 96 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 OR4A47Q6IF82 309 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 ACSM6Q6P461 480 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 C19orf35Q6ZS72 473 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 CMTM1Q8IZ96 169 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 OR5T1Q8NG75 326 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 OR51S1Q8NGJ8 323 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 OR13C8Q8NGS7 320 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 MS4A10Q96PG2 267 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 CITED4Q96RK1 184 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 TM2D3Q9BRN9 247 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 GPN1Q9HCN4 374 aaPredicted RBP8.24□□□□□ -1.09
TPM1-227ENST00000560970 SLC2A9Q9NRM0 540 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 BET1LQ9NYM9 111 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 COMMD9Q9P000 198 aa8.24□□□□□ -1.09
TPM1-227ENST00000560970 MSGN1A6NI15 193 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 SNRPGP15A8MWD9 76 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 RBMXL2O75526 392 aaKnown RBP8.23□□□□□ -1.09
TPM1-227ENST00000560970 HRASP01112 189 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 IL6RP08887 468 aaPredicted RBP8.23□□□□□ -1.09
TPM1-227ENST00000560970 NQO2P16083 231 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 F2RP25116 425 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 LPAR6P43657 344 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 TPPP2P59282 170 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 RND3P61587 244 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 TMEM267Q0VDI3 215 aaPredicted RBP8.23□□□□□ -1.09
TPM1-227ENST00000560970 TCTE3Q8IZS6 198 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 VSTM2AQ8TAG5 236 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 MARCH1Q8TCQ1 289 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 CD300LFQ8TDQ1 290 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 PHB2Q99623 299 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 MED28Q9H204 178 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 PLEKHA2Q9HB19 425 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 TMEM140Q9NV12 185 aa8.23□□□□□ -1.09
TPM1-227ENST00000560970 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 MARCH11A6NNE9 402 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 UPK2O00526 184 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 CREBL2O60519 120 aaPredicted RBP8.22□□□□□ -1.09
TPM1-227ENST00000560970 IGHV3-11P01762 117 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 OR9G9P0C7N8 305 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 G6PCP35575 357 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 RPL27AP46776 148 aaKnown RBP8.22□□□□□ -1.09
TPM1-227ENST00000560970 EIF2B2P49770 351 aaKnown RBP8.22□□□□□ -1.09
TPM1-227ENST00000560970 PIGPP57054 158 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 CD300CQ08708 224 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 LPCAT3Q6P1A2 487 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 ADAD2Q8NCV1 583 aaKnown RBP8.22□□□□□ -1.09
TPM1-227ENST00000560970 DMBX1Q8NFW5 382 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 TERB2Q8NHR7 220 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 ST6GAL2Q96JF0 529 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 OR4C12Q96R67 309 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 TP53RKQ96S44 253 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 FLVCR2Q9UPI3 526 aa8.22□□□□□ -1.09
TPM1-227ENST00000560970 H3BUA1 57 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 MPPED1O15442 326 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 ACTL6BO94805 426 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 PRH1P02810 166 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 TRGV3P03979 118 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 HSPB1P04792 205 aaKnown RBP8.21□□□□□ -1.1
TPM1-227ENST00000560970 SULT1A3P0DMM9 295 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 SULT1A4P0DMN0 295 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 IGHV4-30-4P0DP06 118 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 AREGP15514 252 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 HLA-GP17693 338 aa8.21□□□□□ -1.1
TPM1-227ENST00000560970 RPL8P62917 257 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms