RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CRYGBP07316 175 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 FUT3P21217 361 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 TGFBR1P36897 503 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 SCAND1P57086 179 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 ZNF124Q15973 351 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 CTF1Q16619 201 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 UNQ9165/PRO28630Q6UXU0 137 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 ZNF767PQ75MW2 155 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 C5orf24Q7Z6I8 188 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 TTC9CQ8N5M4 171 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 ZNF383Q8NA42 475 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 CHMP1AQ9HD42 196 aaPredicted RBP6.89□□□□□ -1.31
HERC1-210ENST00000560897 PTTG2Q9NZH5 202 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 ZNF257Q9Y2Q1 563 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 TMED3Q9Y3Q3 217 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 ETV7Q9Y603 341 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 S4R3C0 116 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 FAT1Q14517 4588 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 A0A075B6Q4 140 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 C15orf61A6NNL5 157 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 H3BMQ9 156 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 M0R1X1 148 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 ITGB1BP1O14713 200 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 DHFRP00374 187 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 GLAP06280 429 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 RAB6AP20340 208 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 RPS27AP62979 156 aaKnown RBP6.88□□□□□ -1.31
HERC1-210ENST00000560897 ARFRP1Q13795 201 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 HMGN3Q15651 99 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 RTL8BQ17RB0 113 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 C12orf74Q32Q52 190 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 SERTAD4-AS1Q5TG53 156 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 OR10K2Q6IF99 312 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 SAMD12Q8N8I0 201 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 MCFD2Q8NI22 146 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 SETD6Q8TBK2 473 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 C15orf40Q8WUR7 153 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 PTX4Q96A99 478 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 DCUN1D5Q9BTE7 237 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 SPATA2Q9UM82 520 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 MRPS7Q9Y2R9 242 aaKnown RBP6.88□□□□□ -1.31
HERC1-210ENST00000560897 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
HERC1-210ENST00000560897 ELOA3CA0A087WX78 387 aaPredicted RBP6.87□□□□□ -1.31
HERC1-210ENST00000560897 TMEM272A0A1B0GTI8 110 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 CTSDP07339 412 aaPredicted RBP6.87□□□□□ -1.31
HERC1-210ENST00000560897 CD3GP09693 182 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 TFPI2P48307 235 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 SPCS2Q15005 226 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 PRSS8Q16651 343 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 TMEM41BQ5BJD5 291 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 PLET1Q6UQ28 207 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 TEX45Q8NA69 505 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 TRIM63Q969Q1 353 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 RAB3CQ96E17 227 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 CMTM3Q96MX0 182 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 RIMS4Q9H426 269 aaPredicted RBP6.87□□□□□ -1.31
HERC1-210ENST00000560897 DAZ1Q9NQZ3 744 aaKnown RBP6.87□□□□□ -1.31
HERC1-210ENST00000560897 RHBDL2Q9NX52 303 aa6.87□□□□□ -1.31
HERC1-210ENST00000560897 TRAV18A0A075B6X5 111 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 TRBV7-1A0A0A6YYK4 115 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 IGHV3-35A0A0C4DH35 117 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 TMEM14DPA8MWL7 114 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 F8W735 103 aaPredicted RBP6.86□□□□□ -1.31
HERC1-210ENST00000560897 PDCD6O75340 191 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 CLEC3BP05452 202 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 CD37P11049 281 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 ZBTB25P24278 435 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 PSMB6P28072 239 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 GPR183P32249 361 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 CEACAM6P40199 344 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 FAM3BP58499 235 aaPredicted RBP6.86□□□□□ -1.31
HERC1-210ENST00000560897 GNG2P59768 71 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 UBE2KP61086 200 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 UBE2NLQ5JXB2 153 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 STHQ8IWL8 128 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 LYPD1Q8N2G4 141 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 OR10R2Q8NGX6 335 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 LGALS14Q8TCE9 139 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 CXorf58Q96LI9 332 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 GFI1Q99684 422 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 AGMATQ9BSE5 352 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 SCRT1Q9BWW7 348 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 C11orf54Q9H0W9 315 aaPredicted RBP6.86□□□□□ -1.31
HERC1-210ENST00000560897 CCDC59Q9P031 241 aaKnown RBP6.86□□□□□ -1.31
HERC1-210ENST00000560897 CELA1Q9UNI1 258 aa6.86□□□□□ -1.31
HERC1-210ENST00000560897 A0A0A6YYH2 397 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 A6NJ64 397 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 APOA1P02647 267 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 RRASP10301 218 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 DEFA4P12838 97 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 RPA2P15927 270 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 HIST1H1BP16401 226 aaKnown RBP6.85□□□□□ -1.31
HERC1-210ENST00000560897 CDNFQ49AH0 187 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 TMEM69Q5SWH9 247 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 IDO2Q6ZQW0 420 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 MOB1BQ7L9L4 216 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 TMEM190Q8WZ59 177 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 DIRAS2Q96HU8 199 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms