RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
VPS18-203ENST00000558855 CHRDL1Q9BU40 450 aa10.11□□□□□ -0.79
VPS18-203ENST00000558855 PLEKHA2Q9HB19 425 aa10.11□□□□□ -0.79
VPS18-203ENST00000558855 IFT46Q9NQC8 304 aa10.11□□□□□ -0.79
VPS18-203ENST00000558855 SLC2A8Q9NY64 477 aa10.11□□□□□ -0.79
VPS18-203ENST00000558855 MARCH11A6NNE9 402 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 IGKV1-39P01597 117 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 IGKV1D-39P04432 117 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 OR13C7P0DN81 318 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 DEFA4P12838 97 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
VPS18-203ENST00000558855 ADMP35318 185 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 G6PCP35575 357 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 LPAR6P43657 344 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 CBX5P45973 191 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 HERV-K104P61576 105 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 NCS1P62166 190 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 CATR1Q13166 79 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 GDPD1Q8N9F7 314 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 DMBX1Q8NFW5 382 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 QTRT1Q9BXR0 403 aaKnown RBP10.1□□□□□ -0.79
VPS18-203ENST00000558855 ZNF436Q9C0F3 470 aaPredicted RBP10.1□□□□□ -0.79
VPS18-203ENST00000558855 NDUFA4L2Q9NRX3 87 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 COMMD9Q9P000 198 aa10.1□□□□□ -0.79
VPS18-203ENST00000558855 TRBV7-1A0A0A6YYK4 115 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 OR2T8A6NH00 312 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 K7EIM0 57 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 TGOLN2O43493 480 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 ZNF207O43670 478 aaKnown RBP10.09□□□□□ -0.79
VPS18-203ENST00000558855 IFNA6P05013 189 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 SERPINE2P07093 398 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 F2RP25116 425 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 HRH1P35367 487 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 PHLDA2Q53GA4 152 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 TMEM69Q5SWH9 247 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 OVOL2Q9BRP0 275 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 COMMD5Q9GZQ3 224 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 UBQLN2Q9UHD9 624 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
VPS18-203ENST00000558855 KMT2AQ03164 3969 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 DNAH10Q8IVF4 4471 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 DHFRP00374 187 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 KRASP01116 189 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 TRAPPC2P0DI81 140 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 TRAPPC2BP0DI82 140 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 PTBP1P26599 531 aaKnown RBP eCLIP10.08□□□□□ -0.8
VPS18-203ENST00000558855 HLA-DMAP28067 261 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 FAM106AQ4KMX7 169 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 OR52B4Q8NGK2 314 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 OR5H2Q8NGV7 314 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 GPX8Q8TED1 209 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 DGCR14Q96DF8 476 aaKnown RBP10.08□□□□□ -0.8
VPS18-203ENST00000558855 CXorf58Q96LI9 332 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 HINT2Q9BX68 163 aa10.08□□□□□ -0.8
VPS18-203ENST00000558855 F11RQ9Y624 299 aaKnown RBP10.08□□□□□ -0.8
VPS18-203ENST00000558855 IZUMO4Q1ZYL8 232 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 ODF3L2Q3SX64 289 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 SLC25A24Q6NUK1 477 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 PLET1Q6UQ28 207 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 OR1L8Q8NGR8 309 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 SCARB1Q8WTV0 552 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 SLC25A46Q96AG3 418 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 S100A16Q96FQ6 103 aaKnown RBP10.07□□□□□ -0.8
VPS18-203ENST00000558855 SRSF8Q9BRL6 282 aaKnown RBP10.07□□□□□ -0.8
VPS18-203ENST00000558855 NAA50Q9GZZ1 169 aaKnown RBP10.07□□□□□ -0.8
VPS18-203ENST00000558855 OR51B2Q9Y5P1 312 aa10.07□□□□□ -0.8
VPS18-203ENST00000558855 VPS13DQ5THJ4 4388 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 GPR31O00270 319 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 IGHV3-48P01763 117 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 FGF2P09038 288 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 VBP1P61758 197 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 ZNF124Q15973 351 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 RNASE12Q5GAN4 147 aaKnown RBP10.06□□□□□ -0.8
VPS18-203ENST00000558855 SNX29P2Q8IUI4 249 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 TSPAN14Q8NG11 270 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 VN1R17PQ8TDU5 208 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 SEC22AQ96IW7 307 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 FUNDC2Q9BWH2 189 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 GGTLC1Q9BX51 225 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 MRPL27Q9P0M9 148 aaKnown RBP10.06□□□□□ -0.8
VPS18-203ENST00000558855 COMMD3Q9UBI1 195 aa10.06□□□□□ -0.8
VPS18-203ENST00000558855 DNAH6Q9C0G6 4158 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 C15orf61A6NNL5 157 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 M0QYG6 137 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 HPGDSO60760 199 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 ELK1P19419 428 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 PRSS3P35030 304 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 TAS2R46P59540 309 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 SLC16A13Q7RTY0 426 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 TBC1D26Q86UD7 250 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 CD300LFQ8TDQ1 290 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 LSM10Q969L4 123 aaKnown RBP10.05□□□□□ -0.8
VPS18-203ENST00000558855 AIFM2Q9BRQ8 373 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 TMEM14BQ9NUH8 114 aa10.05□□□□□ -0.8
VPS18-203ENST00000558855 LOC102724200A0A096LPH7 203 aaPredicted RBP10.04□□□□□ -0.8
VPS18-203ENST00000558855 IGHV3-49A0A0A0MS15 119 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 TMEM127O75204 238 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 CTSGP08311 255 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 PI3P19957 117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms