RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 C3orf84H3BNL1 204 aa9□□□□□ -0.97
HERC1-202ENST00000558324 LGALS9O00182 355 aa9□□□□□ -0.97
HERC1-202ENST00000558324 SNAPC5O75971 98 aa9□□□□□ -0.97
HERC1-202ENST00000558324 GABARAPO95166 117 aa9□□□□□ -0.97
HERC1-202ENST00000558324 CD7P09564 240 aa9□□□□□ -0.97
HERC1-202ENST00000558324 CBLN1P23435 193 aa9□□□□□ -0.97
HERC1-202ENST00000558324 S100GP29377 79 aa9□□□□□ -0.97
HERC1-202ENST00000558324 WT1-ASQ06250 92 aa9□□□□□ -0.97
HERC1-202ENST00000558324 HAGHQ16775 308 aa9□□□□□ -0.97
HERC1-202ENST00000558324 FAM106AQ4KMX7 169 aa9□□□□□ -0.97
HERC1-202ENST00000558324 GPR107Q5VW38 600 aa9□□□□□ -0.97
HERC1-202ENST00000558324 SLC25A24Q6NUK1 477 aa9□□□□□ -0.97
HERC1-202ENST00000558324 MZT2AQ6P582 158 aa9□□□□□ -0.97
HERC1-202ENST00000558324 UNQ9165/PRO28630Q6UXU0 137 aa9□□□□□ -0.97
HERC1-202ENST00000558324 TBC1D26Q86UD7 250 aa9□□□□□ -0.97
HERC1-202ENST00000558324 GPHB5Q86YW7 130 aa9□□□□□ -0.97
HERC1-202ENST00000558324 GDPD1Q8N9F7 314 aa9□□□□□ -0.97
HERC1-202ENST00000558324 OR1L8Q8NGR8 309 aa9□□□□□ -0.97
HERC1-202ENST00000558324 CMTM3Q96MX0 182 aa9□□□□□ -0.97
HERC1-202ENST00000558324 SRSF8Q9BRL6 282 aaKnown RBP9□□□□□ -0.97
HERC1-202ENST00000558324 SLC2A8Q9NY64 477 aa9□□□□□ -0.97
HERC1-202ENST00000558324 THYN1Q9P016 225 aa9□□□□□ -0.97
HERC1-202ENST00000558324 OR51B2Q9Y5P1 312 aa9□□□□□ -0.97
HERC1-202ENST00000558324 RYR3Q15413 4870 aa9□□□□□ -0.97
HERC1-202ENST00000558324 TENM3Q9P273 2699 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 DBX1A6NMT0 343 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 ZNF785A8K8V0 405 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 CYB5BO43169 146 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 SERPINE2P07093 398 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 FGF2P09038 288 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 CTF1Q16619 201 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 KLK9Q2XQG4 91 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 TM4SF20Q53R12 229 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 THOC7Q6I9Y2 204 aaKnown RBP8.99□□□□□ -0.97
HERC1-202ENST00000558324 LPCAT3Q6P1A2 487 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 PLET1Q6UQ28 207 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 BTNL8Q6UX41 500 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 LAX1Q8IWV1 398 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 TMEM61Q8N0U2 210 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 UXS1Q8NBZ7 420 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 ZNF502Q8TBZ5 544 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 AP3S1Q92572 193 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 LSM10Q969L4 123 aaKnown RBP8.99□□□□□ -0.97
HERC1-202ENST00000558324 SPATA25Q9BR10 227 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 RETNQ9HD89 108 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 PALMDQ9NP74 551 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 NDUFA4L2Q9NRX3 87 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 TECRQ9NZ01 308 aaKnown RBP8.99□□□□□ -0.97
HERC1-202ENST00000558324 EXTL2Q9UBQ6 330 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 MLXQ9UH92 298 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 KLK9Q9UKQ9 250 aa8.99□□□□□ -0.97
HERC1-202ENST00000558324 OR2T8A6NH00 312 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 A8MWP6 167 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 SCAF4O95104 1147 aaKnown RBP8.98□□□□□ -0.97
HERC1-202ENST00000558324 PGAM2P15259 253 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 PI3P19957 117 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 PTBP1P26599 531 aaKnown RBP eCLIP8.98□□□□□ -0.97
HERC1-202ENST00000558324 MFAP2P55001 183 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 RNASE10Q5GAN6 216 aaKnown RBP8.98□□□□□ -0.97
HERC1-202ENST00000558324 CASC10Q5T4H9 136 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 ZNF57Q68EA5 555 aaPredicted RBP8.98□□□□□ -0.97
HERC1-202ENST00000558324 ZFAND6Q6FIF0 208 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 HSD17B13Q7Z5P4 300 aaPredicted RBP8.98□□□□□ -0.97
HERC1-202ENST00000558324 SLC38A6Q8IZM9 456 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 UBAC2Q8NBM4 344 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 OR52I2Q8NH67 350 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 MRGPRFQ96AM1 343 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 CITED4Q96RK1 184 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 SRD5A3Q9H8P0 318 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 KLK11Q9UBX7 282 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 PRNDQ9UKY0 176 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 F11RQ9Y624 299 aaKnown RBP8.98□□□□□ -0.97
HERC1-202ENST00000558324 CEPT1Q9Y6K0 416 aa8.98□□□□□ -0.97
HERC1-202ENST00000558324 NBEAL2Q6ZNJ1 2754 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 IGHV3OR16-8A0A075B7F1 116 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 C15orf61A6NNL5 157 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 OR11H12B2RN74 326 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 TGOLN2O43493 480 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 IFNA6P05013 189 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 LYL1P12980 280 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 ZNF182P17025 639 aaPredicted RBP8.97□□□□□ -0.97
HERC1-202ENST00000558324 PPP5CP53041 499 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 H2BFWTQ7Z2G1 175 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 VN1R17PQ8TDU5 208 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 ISOC1Q96CN7 298 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 TMEM56Q96MV1 263 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
HERC1-202ENST00000558324 MRPS26Q9BYN8 205 aaKnown RBP8.97□□□□□ -0.97
HERC1-202ENST00000558324 RBMY1BA6NDE4 496 aaKnown RBP8.96□□□□□ -0.98
HERC1-202ENST00000558324 RBMY1EA6NEQ0 496 aaKnown RBP8.96□□□□□ -0.98
HERC1-202ENST00000558324 RGS5O15539 181 aa8.96□□□□□ -0.98
HERC1-202ENST00000558324 IGKV1-39P01597 117 aa8.96□□□□□ -0.98
HERC1-202ENST00000558324 CD3DP04234 171 aa8.96□□□□□ -0.98
HERC1-202ENST00000558324 IGKV1D-39P04432 117 aa8.96□□□□□ -0.98
HERC1-202ENST00000558324 RBMY1DP0C7P1 496 aaKnown RBP8.96□□□□□ -0.98
HERC1-202ENST00000558324 UCP3P55916 312 aa8.96□□□□□ -0.98
HERC1-202ENST00000558324 IZUMO4Q1ZYL8 232 aa8.96□□□□□ -0.98
HERC1-202ENST00000558324 Q56UQ5 140 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms