RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 OR8U1Q8NH10 309 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 ABHD5Q8WTS1 349 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 C4orf3Q8WVX3 66 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 CLCC1Q96S66 551 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 PDCD10Q9BUL8 212 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 FBXL15Q9H469 300 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 SLA2Q9H6Q3 261 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 GNB4Q9HAV0 340 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 PAIP2BQ9ULR5 123 aaKnown RBP5.87□□□□□ -1.47
SPG11-205ENST00000558080 KCNIP3Q9Y2W7 256 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 WASHC3Q9Y3C0 194 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 FBXO7Q9Y3I1 522 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
SPG11-205ENST00000558080 NBEAL2Q6ZNJ1 2754 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 TRBV6-7A0A0A0MS04 114 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 SEC14L6B5MCN3 397 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 ITGB1BP1O14713 200 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 RRHO14718 337 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 PROP1O75360 226 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 SIX6O95475 246 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 NFYAP23511 347 aaPredicted RBP5.86□□□□□ -1.47
SPG11-205ENST00000558080 S100GP29377 79 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 MC5RP33032 325 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 PIGPP57054 158 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 RND3P61587 244 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 RPS16P62249 146 aaKnown RBP5.86□□□□□ -1.47
SPG11-205ENST00000558080 SUPT4H1P63272 117 aaKnown RBP5.86□□□□□ -1.47
SPG11-205ENST00000558080 CX3CL1P78423 397 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 SRPXP78539 464 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 CYCSP99999 105 aaKnown RBP5.86□□□□□ -1.47
SPG11-205ENST00000558080 NDPQ00604 133 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 KIAA0141Q14154 515 aaPredicted RBP5.86□□□□□ -1.47
SPG11-205ENST00000558080 IGSF11Q5DX21 431 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 FAM71F2Q6NXP2 309 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 GSG1LQ6UXU4 331 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 KCTD9Q7L273 389 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 C9orf62Q8N4C0 152 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 ZNF491Q8N8L2 437 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 OR5AN1Q8NGI8 311 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 OR1N2Q8NGR9 330 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 OR10J5Q8NHC4 309 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 GALNT14Q96FL9 552 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 AGMATQ9BSE5 352 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 NAA60Q9H7X0 242 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 RDH8Q9NYR8 311 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 COMMD9Q9P000 198 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 ZNF580Q9UK33 172 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 GAB2Q9UQC2 676 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 HSPB11Q9Y547 144 aa5.86□□□□□ -1.47
SPG11-205ENST00000558080 PIGBOS1A0A0B4J2F0 54 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 A0A1W2PN81 502 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 C5orf51A6NDU8 294 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 FAM25EA8MYX2 175 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 G3V3Q6 166 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 M0R1X1 148 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 GPR31O00270 319 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 CCSO14618 274 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 EGR2P11161 476 aaPredicted RBP5.85□□□□□ -1.47
SPG11-205ENST00000558080 CHRNA7P36544 502 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 RAB9AP51151 201 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 GNB1P62873 340 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 CD69Q07108 199 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 PSG5Q15238 335 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 C9orf66Q5T8R8 295 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 C11orf87Q6NUJ2 197 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 UNQ5815/PRO19632Q6UWF5 114 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 PPP1R27Q86WC6 154 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 CMTM1Q8IZ96 169 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 H1FOOQ8IZA3 346 aaPredicted RBP5.85□□□□□ -1.47
SPG11-205ENST00000558080 ZNF383Q8NA42 475 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 OR11H4Q8NGC9 324 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 MYOZ3Q8TDC0 251 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 UBE2E2Q96LR5 201 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 MS4A10Q96PG2 267 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 PRR25Q96S07 402 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 FAM103A1Q9BTL3 118 aaKnown RBP5.85□□□□□ -1.47
SPG11-205ENST00000558080 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 SLC5A7Q9GZV3 580 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 SLC2A9Q9NRM0 540 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 METTL1Q9UBP6 276 aaKnown RBP5.85□□□□□ -1.47
SPG11-205ENST00000558080 OR2W1Q9Y3N9 320 aa5.85□□□□□ -1.47
SPG11-205ENST00000558080 FXYD6-FXYD2A0A087WZ82 144 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 HMSDA8MTL9 139 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 I3L521 148 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 L7N2F9 121 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 MPPED1O15442 326 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 SLC25A17O43808 307 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 SOX15O60248 233 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 B3GALNT1O75752 331 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 CA2P00918 260 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 IFNA21P01568 189 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 IGHV3-11P01762 117 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 APOA2P02652 100 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 IGKV1-16P04430 117 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 OR8U9P0C7N5 309 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 SLC25A4P12235 298 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 RUNX1Q01196 453 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 IFITM2Q01629 132 aa5.84□□□□□ -1.47
SPG11-205ENST00000558080 TAGLNQ01995 201 aaKnown RBP5.84□□□□□ -1.47
SPG11-205ENST00000558080 ZNF616Q08AN1 781 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms