RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TEX50A0A1B0GTY4 177 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 MT-ND4LP03901 98 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 G0S2P27469 103 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 ERVK-16P61578 105 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 PRCDQ00LT1 54 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 SLC38A11Q08AI6 406 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 AKIRIN2Q53H80 203 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 DPPA3Q6W0C5 159 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 OR4A16Q8NH70 328 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 TMEM167AQ8TBQ9 72 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 CFHR4Q92496 578 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 RAB24Q969Q5 203 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 GNPNAT1Q96EK6 184 aaPredicted RBP7.18□□□□□ -1.26
TDP1-210ENST00000554976 CXorf65A6NEN9 183 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 E7EUB6 86 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 RRHO14718 337 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 SNCAP37840 140 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 REG1BP48304 166 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 HSPE1P61604 102 aaKnown RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 HNF4GQ14541 408 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 ZNF726P1Q15940 193 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 ATP6V1FQ16864 119 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 TMEM182Q6ZP80 229 aaPredicted RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 SSX7Q7RTT5 188 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 OR10X1Q8NGY0 326 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 NDUFA4L2Q9NRX3 87 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 WASHC3Q9Y3C0 194 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 IGHV1-3A0A0C4DH29 117 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 A0A1W2PPH5 198 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 LINC00614P0C842 121 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 F2RL1P55085 397 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 SSBP2P81877 361 aaPredicted RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 FBLN7Q53RD9 439 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 MALSU1Q96EH3 234 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 PRNDQ9UKY0 176 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 OR51B2Q9Y5P1 312 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 COL6A6A6NMZ7 2263 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 DIDO1Q9BTC0 2240 aaKnown RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 LOC105371242A0A075B767 164 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 UMAD1C9J7I0 102 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 SCAF4O95104 1147 aaKnown RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 HOXB4P17483 251 aaPredicted RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 GPR6P46095 362 aaPredicted RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 HBG1P69891 147 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 HBG2P69892 147 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 PRB3Q04118 309 aaPredicted RBP7.17□□□□□ -1.26
TDP1-210ENST00000554976 GAGE1Q13065 139 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 SPNS3Q6ZMD2 512 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 OR4C13Q8NGP0 309 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 RSG1Q9BU20 258 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 VSIRQ9H7M9 311 aa7.17□□□□□ -1.26
TDP1-210ENST00000554976 KMT2BQ9UMN6 2715 aaPredicted RBP7.16□□□□□ -1.26
TDP1-210ENST00000554976 PKDREJQ9NTG1 2253 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 C9JQL5 133 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 HOXA5P20719 270 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 PRTN3P24158 256 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 PRRX1P54821 245 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 TAF15Q92804 592 aaKnown RBP eCLIP7.16□□□□□ -1.26
TDP1-210ENST00000554976 LHX4Q969G2 390 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 TMEM147Q9BVK8 224 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 TRAV1-1A0A0B4J248 108 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 CEBPZOSA8MTT3 80 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 IGKV1D-33P01593 117 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 IGKV1-33P01594 117 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 APOA2P02652 100 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 TPTE2P1Q5T6R2 138 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 CLDND2Q8NHS1 167 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 FLYWCH2Q96CP2 140 aaKnown RBP7.16□□□□□ -1.26
TDP1-210ENST00000554976 HARBI1Q96MB7 349 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 TPSG1Q9NRR2 321 aa7.16□□□□□ -1.26
TDP1-210ENST00000554976 LSM4Q9Y4Z0 139 aaKnown RBP7.16□□□□□ -1.26
TDP1-210ENST00000554976 IGHV2-70DA0A0C4DH43 119 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 MC5RP33032 325 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 CDX1P47902 265 aaPredicted RBP7.15□□□□□ -1.26
TDP1-210ENST00000554976 PNKDQ8N490 385 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 OR5B3Q8NH48 314 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 BPESC1Q9GZL8 116 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 SIRT7Q9NRC8 400 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 WDR83OSQ9Y284 106 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 ABCA2Q9BZC7 2435 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 ABCA4P78363 2273 aa7.15□□□□□ -1.26
TDP1-210ENST00000554976 UBE2L5PA0A1B0GUS4 154 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 FNDC10F2Z333 226 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 RNASEK-C17orf49H0YIS7 233 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 IL3RAP26951 378 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 S100A2P29034 98 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 DLK1P80370 383 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 OR8G2PQ6IF36 304 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 CDPF1Q6NVV7 123 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 ACSM6Q6P461 480 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 COMMD1Q8N668 190 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 PINX1Q96BK5 328 aaKnown RBP7.15□□□□□ -1.27
TDP1-210ENST00000554976 HRH4Q9H3N8 390 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 TUBA4BQ9H853 241 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 ONECUT1Q9UBC0 465 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 KPTNQ9Y664 436 aa7.15□□□□□ -1.27
TDP1-210ENST00000554976 IFNA17P01571 189 aa7.14□□□□□ -1.27
TDP1-210ENST00000554976 RNASE2P10153 161 aaKnown RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 USF1P22415 310 aaPredicted RBP7.14□□□□□ -1.27
TDP1-210ENST00000554976 CNTFRP26992 372 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms