RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 FADS2O95864 444 aaKnown RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 IGHV3-11P01762 117 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 APOC3P02656 99 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 OR8U9P0C7N5 309 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 CGB3P0DN86 165 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 CGB7P0DN87 165 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 MYL12AP19105 171 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 EPHA2P29317 976 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 RAB9AP51151 201 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 DAPP51397 102 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 PPP3R1P63098 170 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 EIF5AP63241 154 aaKnown RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 DLK1P80370 383 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 MRPS10P82664 201 aaKnown RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 PITPNAQ00169 270 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ZNF816Q0VGE8 651 aaPredicted RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 KIAA0141Q14154 515 aaPredicted RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 EBI3Q14213 229 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FCN2Q15485 313 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 CTF1Q16619 201 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 NHLRC3Q5JS37 347 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TMEM244Q5VVB8 128 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 NXNL2Q5VZ03 156 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SSX7Q7RTT5 188 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FAM71E2Q8N5Q1 922 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 C15orf54Q8N8G6 183 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 CCDC71LQ8N9Z2 235 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 OR10V1Q8NGI7 309 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 OR2G2Q8NGZ5 317 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 CNIH3Q8TBE1 160 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TNFAIP8L1Q8WVP5 186 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 RTN4IP1Q8WWV3 396 aaPredicted RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ARL11Q969Q4 196 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 C10orf35Q96D05 121 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 GPER1Q99527 375 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 CMSS1Q9BQ75 279 aaKnown RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FAM110AQ9BQ89 295 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 VPS25Q9BRG1 176 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FUNDC2Q9BWH2 189 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SLIRPQ9GZT3 109 aaKnown RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 NAA50Q9GZZ1 169 aaKnown RBP4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SCN3BQ9NY72 215 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ZNF581Q9P0T4 197 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 KIAA1456Q9P272 454 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 GNG12Q9UBI6 72 aa4.26□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TRAV41A0A0B4J266 112 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TMEM30CPA0ZSE6 113 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 C20orf202A1L168 122 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FAM74A7A6NL05 159 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 A8MWP6 167 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 A8MZ25 164 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 DIRC3C9JPN6 131 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ORC5O43913 435 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 OR7C1O76099 320 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 IGF1P05019 195 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 HTR1AP08908 422 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 CNTFRP26992 372 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 BLVRBP30043 206 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 PPIFP30405 207 aaKnown RBP4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 RRAS2P62070 204 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SELENOTP62341 195 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 DEFA5Q01523 94 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ZNF85Q03923 595 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FABP9Q0Z7S8 132 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 RSU1Q15404 277 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 RBMY1FQ15415 496 aaKnown RBP4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 KISS1Q15726 138 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 NEDD8Q15843 81 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FAM74A3Q4VXF1 159 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ZNF691Q5VV52 312 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ACSM6Q6P461 480 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TMED4Q7Z7H5 227 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SAXO1Q8IYX7 474 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ZFP82Q8N141 532 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 MS4A15Q8N5U1 240 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 PARP16Q8N5Y8 322 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SUMF2Q8NBJ7 301 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 UXS1Q8NBZ7 420 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 COQ8AQ8NI60 647 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 MYOZ3Q8TDC0 251 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SCARB1Q8WTV0 552 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ASB9Q96DX5 294 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 SAT2Q96F10 170 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 RITA1Q96K30 269 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 C4orf36Q96KX1 117 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TMEM56Q96MV1 263 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 MS4A10Q96PG2 267 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 MBOAT4Q96T53 435 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 GINS4Q9BRT9 223 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 OR51J1Q9H342 316 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TUBA4BQ9H853 241 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 LINC00574Q9H8X3 128 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 FAM212BQ9NTI7 297 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 ZFP30Q9Y2G7 519 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 TMEM56-RWDD3S4R434 201 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 RNF213Q63HN8 5207 aa4.25□□□□□ -1.73
SMARCE1P3-201ENST00000553649 IGHV7-81A0A0B4J1V7 117 aa4.24□□□□□ -1.73
SMARCE1P3-201ENST00000553649 GAGE12BA1L429 117 aa4.24□□□□□ -1.73
SMARCE1P3-201ENST00000553649 GAGE12HA6NDE8 117 aa4.24□□□□□ -1.73
SMARCE1P3-201ENST00000553649 C15orf65H3BRN8 121 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms