RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 C1QL1O75973 258 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 LYNX1P0DP58 116 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 HTR1DP28221 377 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 FHITP49789 147 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 RPS16P62249 146 aaKnown RBP5.91□□□□□ -1.46
ATXN3-221ENST00000553498 UTF1Q5T230 341 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 AVPI1Q5T686 147 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 MINOS1Q5TGZ0 78 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 CCDC144NLQ6NUI1 221 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 CLDND2Q8NHS1 167 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 RPEQ96AT9 228 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 RCC1LQ96I51 464 aaKnown RBP5.91□□□□□ -1.46
ATXN3-221ENST00000553498 TXNDC17Q9BRA2 123 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 RSG1Q9BU20 258 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 MANBALQ9NQG1 85 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 SLC39A9Q9NUM3 307 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 DPM3Q9P2X0 92 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 LSM4Q9Y4Z0 139 aaKnown RBP5.91□□□□□ -1.46
ATXN3-221ENST00000553498 MINOS1-NBL1R4GNA1 71 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 RTTNQ86VV8 2226 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 PRRC2CQ9Y520 2896 aaKnown RBP5.9□□□□□ -1.46
ATXN3-221ENST00000553498 IGHV1-3A0A0C4DH29 117 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 SMCO3A2RU48 225 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 MAP1LC3B2A6NCE7 125 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 SRRM4A7MD48 611 aaKnown RBP5.9□□□□□ -1.46
ATXN3-221ENST00000553498 CORTO00230 105 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 RRHO14718 337 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 ACTL6BO94805 426 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 MT-CO2P00403 227 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 CA2P00918 260 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 IGLV2-23P01705 113 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 BCL2P10415 239 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 ADCYAP1P18509 176 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 PAX6P26367 422 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 RPL29P47914 159 aaKnown RBP5.9□□□□□ -1.46
ATXN3-221ENST00000553498 UQCRFS1P47985 274 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 PSMB3P49720 205 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 SRSF3P84103 164 aaKnown RBP5.9□□□□□ -1.46
ATXN3-221ENST00000553498 PAX2Q02962 417 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 AKR1C1Q04828 323 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 HABP2Q14520 560 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-221ENST00000553498 RHEBQ15382 184 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 SSX2Q16385 188 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 SOHLH1Q5JUK2 328 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 FFAR4Q5NUL3 377 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 ETFRF1Q6IPR1 90 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 TMEM144Q7Z5S9 345 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 PNKDQ8N490 385 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 RPP25LQ8N5L8 163 aaKnown RBP5.9□□□□□ -1.46
ATXN3-221ENST00000553498 ZNF114Q8NC26 417 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 OR4P4Q8NGL7 312 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 OR10G9Q8NGN4 311 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 OR10G7Q8NGN6 311 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 NANPQ8TBE9 248 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 SLC35E1Q96K37 410 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 MAP1LC3BQ9GZQ8 125 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 TUBA4BQ9H853 241 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 UBTD1Q9HAC8 227 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 ONECUT1Q9UBC0 465 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 VAX2Q9UIW0 290 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 FAM96BQ9Y3D0 163 aa5.9□□□□□ -1.46
ATXN3-221ENST00000553498 INTS1Q8N201 2190 aaKnown RBP5.9□□□□□ -1.47
ATXN3-221ENST00000553498 PTPRQQ9UMZ3 2332 aa5.9□□□□□ -1.47
ATXN3-221ENST00000553498 LOC102723971A0A1B0GUV8 181 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 ODF3BA8MYP8 253 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 B4DEV8 164 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 C22orf46C9J442 243 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 TMEM250H0YL14 139 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 FOXH1O75593 365 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 IGHV2-5P01817 119 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 CRYGBP07316 175 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 PDLIM4P50479 330 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 PNRC1Q12796 327 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-221ENST00000553498 BTN1A1Q13410 526 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 FAM74A3Q4VXF1 159 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 TPTE2P1Q5T6R2 138 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 PVRIGQ6DKI7 326 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 Q8N7P7 452 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 CLRN3Q8NCR9 226 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 OR1L6Q8NGR2 347 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 TMEM170AQ8WVE7 144 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 IGFBPL1Q8WX77 278 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 RNF2Q99496 336 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 TMEM231Q9H6L2 316 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 PRELID1Q9Y255 219 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 TBL2Q9Y4P3 447 aaKnown RBP5.89□□□□□ -1.47
ATXN3-221ENST00000553498 ARL2-SNX15V9GYD0 113 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 SHANK1Q9Y566 2161 aa5.89□□□□□ -1.47
ATXN3-221ENST00000553498 A0A1W2PPV4 95 aa5.88□□□□□ -1.47
ATXN3-221ENST00000553498 SRP19P09132 144 aaKnown RBP5.88□□□□□ -1.47
ATXN3-221ENST00000553498 RNASE2P10153 161 aaKnown RBP5.88□□□□□ -1.47
ATXN3-221ENST00000553498 REG1BP48304 166 aa5.88□□□□□ -1.47
ATXN3-221ENST00000553498 CDC34P49427 236 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-221ENST00000553498 ELLP55199 621 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-221ENST00000553498 DSCR9P59020 149 aa5.88□□□□□ -1.47
ATXN3-221ENST00000553498 SELENOTP62341 195 aa5.88□□□□□ -1.47
ATXN3-221ENST00000553498 CCL20P78556 96 aa5.88□□□□□ -1.47
ATXN3-221ENST00000553498 CD69Q07108 199 aa5.88□□□□□ -1.47
ATXN3-221ENST00000553498 HNF4GQ14541 408 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms