RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 BRS3P32247 399 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 MC5RP33032 325 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 DUTP33316 252 aaKnown RBP5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 DEFA1P59665 94 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 DEFA3P59666 94 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 RND3P61587 244 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 DCTN2Q13561 401 aaKnown RBP5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 LRRC75BQ2VPJ9 315 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 NSUN5P1Q3KNT7 163 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 ZNF585BQ52M93 769 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 RPL39P5Q59GN2 51 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 CMTM1Q8IZ96 169 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 DUSP18Q8NEJ0 188 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 MARCH1Q8TCQ1 289 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 RCHY1Q96PM5 261 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 NABP2Q9BQ15 211 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 RTBDNQ9BSG5 229 aaPredicted RBP5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 SLC2A9Q9NRM0 540 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 FAM212BQ9NTI7 297 aaPredicted RBP5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 COPZ2Q9P299 210 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 LSM4Q9Y4Z0 139 aaKnown RBP5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 HILPDAQ9Y5L2 63 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 POMT1Q9Y6A1 747 aa5.05□□□□□ -1.6
DEPDC4-210ENST00000551642 H0YJW9 148 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 M0R1X1 148 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 PGLYRP1O75594 196 aaPredicted RBP5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 B3GALNT1O75752 331 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 IGHV4-59P01825 116 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 RRASP10301 218 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 PGAM2P15259 253 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 IER3P46695 156 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 REG1BP48304 166 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 RAB13P51153 203 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 CCR6P51684 374 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 CATR1Q13166 79 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 EBI3Q14213 229 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 DHRS7BQ6IAN0 325 aaPredicted RBP5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 KCTD9Q7L273 389 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 PDPNQ86YL7 162 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 TCTEX1D1Q8N7M0 179 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 CCDC71LQ8N9Z2 235 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 ZNF383Q8NA42 475 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 OR5R1Q8NH85 324 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 PIFOQ8TCI5 191 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 CD300LFQ8TDQ1 290 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 SSX3Q99909 188 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 MRPL20Q9BYC9 149 aaKnown RBP5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 DPAGT1Q9H3H5 408 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 C5orf66Q9H5L9 145 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 C14orf166Q9Y224 244 aaKnown RBP5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 VSIG4Q9Y279 399 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 PRELID3BQ9Y3B1 194 aa5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
DEPDC4-210ENST00000551642 FAM240BA0A1B0GVZ2 78 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 CRYM-AS1A6NIL9 109 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 RBFOX2O43251 390 aaKnown RBP eCLIP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 PTTG1O95997 202 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 APOA2P02652 100 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 TCRBP04435 133 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 RLN1P04808 185 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 SNRNP70P08621 437 aaKnown RBP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 FAM106CPP0CH98 169 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 F2RP25116 425 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 PAX6P26367 422 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 KIR2DS2P43631 304 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 PIGPP57054 158 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 BRWD1-AS2P59051 145 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 UBE2MP61081 183 aaKnown RBP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 RPL30P62888 115 aaKnown RBP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 DHODHQ02127 395 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 RTL8BQ17RB0 113 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 ABCA11PQ4W5N1 156 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 PHLDA2Q53GA4 152 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 TMEM128Q5BJH2 165 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 GLDNQ6ZMI3 551 aaPredicted RBP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 C16orf82Q7Z2V1 217 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 NRARPQ7Z6K4 114 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 MOB3BQ86TA1 216 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 TBC1D26Q86UD7 250 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 SLC25A42Q86VD7 318 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 CENPSQ8N2Z9 138 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 Q8N6K4 173 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 POC5Q8NA72 575 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 DRAXINQ8NBI3 349 aaPredicted RBP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 OR2T10Q8NGZ9 312 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 ENKURQ8TC29 256 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 SSMEM1Q8WWF3 244 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 URB1-AS1Q96HZ7 61 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 RNF5Q99942 180 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 ALX4Q9H161 411 aaPredicted RBP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 C20orf85Q9H1P6 137 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 LIN7CQ9NUP9 197 aaKnown RBP5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 PITPNC1Q9UKF7 332 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 TCF19Q9Y242 345 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 WASHC3Q9Y3C0 194 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 NUBP2Q9Y5Y2 271 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
DEPDC4-210ENST00000551642 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
DEPDC4-210ENST00000551642 IGHV3-72A0A0B4J1Y9 119 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms