RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 CRIM1Q9NZV1 1036 aa17.53■□□□□ 0.4
NPAS3-210ENST00000551492 KIAA1324LA8MWY0 1029 aaPredicted RBP17.52■□□□□ 0.4
NPAS3-210ENST00000551492 MEF2BQ02080 365 aaPredicted RBP17.52■□□□□ 0.39
NPAS3-210ENST00000551492 RNPS1Q15287 305 aaKnown RBP17.52■□□□□ 0.39
NPAS3-210ENST00000551492 Q56UQ5 140 aa17.52■□□□□ 0.39
NPAS3-210ENST00000551492 DOLPP1Q86YN1 238 aa17.52■□□□□ 0.39
NPAS3-210ENST00000551492 JMJD8Q96S16 334 aa17.52■□□□□ 0.39
NPAS3-210ENST00000551492 OR2H1Q9GZK4 316 aa17.52■□□□□ 0.39
NPAS3-210ENST00000551492 FZR1Q9UM11 496 aa17.52■□□□□ 0.39
NPAS3-210ENST00000551492 MED13LQ71F56 2210 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 A0A1W2PS18 150 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 TIMP3P35625 211 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 TGFBR3Q03167 851 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 NRN1LQ496H8 165 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 LYPD6Q86Y78 171 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 KCNG3Q8TAE7 436 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 MRPL30Q8TCC3 161 aaKnown RBP17.51■□□□□ 0.39
NPAS3-210ENST00000551492 PERPQ96FX8 193 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 CITED1Q99966 193 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 LRRK2Q5S007 2527 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 TSPAN13O95857 204 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 CA2P00918 260 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 PHLDA2Q53GA4 152 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 PRR31Q5SQ13 230 aa17.51■□□□□ 0.39
NPAS3-210ENST00000551492 CSMD2Q7Z408 3487 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 NKX2-6A6NCS4 301 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 GAGE12HA6NDE8 117 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 STAG3L2P0CL84 134 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 CA7P43166 264 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 YPEL3P61236 119 aaPredicted RBP17.5■□□□□ 0.39
NPAS3-210ENST00000551492 GABRA6Q16445 453 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 LTC4SQ16873 150 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 CXorf66Q5JRM2 361 aaPredicted RBP17.5■□□□□ 0.39
NPAS3-210ENST00000551492 OR4F5Q8NH21 305 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 OR5P3Q8WZ94 311 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 GMPPAQ96IJ6 420 aaPredicted RBP17.5■□□□□ 0.39
NPAS3-210ENST00000551492 TMEM50AO95807 157 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 FAM27E3Q08E93 113 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 TMEM187Q14656 261 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 MDP1Q86V88 176 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 PSG8Q9UQ74 426 aa17.5■□□□□ 0.39
NPAS3-210ENST00000551492 TRAV9-2A0A087WT02 112 aa17.49■□□□□ 0.39
NPAS3-210ENST00000551492 C7orf71A4D174 169 aa17.49■□□□□ 0.39
NPAS3-210ENST00000551492 HIST1H1DP16402 221 aaKnown RBP17.49■□□□□ 0.39
NPAS3-210ENST00000551492 HOXA4Q00056 320 aaPredicted RBP17.49■□□□□ 0.39
NPAS3-210ENST00000551492 CXorf67Q86X51 503 aaPredicted RBP17.49■□□□□ 0.39
NPAS3-210ENST00000551492 OR1F12Q8NHA8 337 aa17.49■□□□□ 0.39
NPAS3-210ENST00000551492 TAAR3PQ9P1P4 343 aa17.49■□□□□ 0.39
NPAS3-210ENST00000551492 SYNGR3O43761 229 aa17.49■□□□□ 0.39
NPAS3-210ENST00000551492 COLCA1Q6ZS62 124 aa17.49■□□□□ 0.39
NPAS3-210ENST00000551492 CACNA1DQ01668 2161 aa17.49■□□□□ 0.39
NPAS3-210ENST00000551492 GTF2H5Q6ZYL4 71 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 OR10P1Q8NGE3 313 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 LIME1Q9H400 295 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 GP6Q9HCN6 339 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 TRGV8A0A0C4DH27 118 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 NPFFR1Q9GZQ6 430 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 A0A087X0K7 114 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 MEGF11A6BM72 1044 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 H3BP45 60 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 CD5LO43866 347 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 PDE6DO43924 150 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 FOXE3Q13461 319 aa17.48■□□□□ 0.39
NPAS3-210ENST00000551492 PIGTQ969N2 578 aa17.47■□□□□ 0.39
NPAS3-210ENST00000551492 ANAPC10Q9UM13 185 aa17.47■□□□□ 0.39
NPAS3-210ENST00000551492 HHLA2Q9UM44 414 aa17.47■□□□□ 0.39
NPAS3-210ENST00000551492 FCN1O00602 326 aa17.47■□□□□ 0.39
NPAS3-210ENST00000551492 MRAP2Q96G30 205 aa17.47■□□□□ 0.39
NPAS3-210ENST00000551492 HRNRQ86YZ3 2850 aaPredicted RBP17.46■□□□□ 0.39
NPAS3-210ENST00000551492 ZNF728P0DKX0 622 aa17.46■□□□□ 0.39
NPAS3-210ENST00000551492 PLCXD3Q63HM9 321 aa17.46■□□□□ 0.39
NPAS3-210ENST00000551492 ZNF474Q6S9Z5 364 aaPredicted RBP17.46■□□□□ 0.39
NPAS3-210ENST00000551492 FBLL1A6NHQ2 334 aaKnown RBP17.46■□□□□ 0.39
NPAS3-210ENST00000551492 CD1BP29016 333 aa17.46■□□□□ 0.39
NPAS3-210ENST00000551492 IER3P46695 156 aa17.46■□□□□ 0.39
NPAS3-210ENST00000551492 FXYD4P59646 89 aa17.46■□□□□ 0.39
NPAS3-210ENST00000551492 OR5AS1Q8N127 324 aa17.46■□□□□ 0.39
NPAS3-210ENST00000551492 C11orf1Q9H5F2 150 aa17.46■□□□□ 0.39
NPAS3-210ENST00000551492 B9A039 149 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 S1PR2O95136 353 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 CLDN1O95832 211 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 PRB1P04280 392 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 ZNF324BQ6AW86 544 aaPredicted RBP17.45■□□□□ 0.38
NPAS3-210ENST00000551492 SMIM20Q8N5G0 67 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 ZNF114Q8NC26 417 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 SLC25A40Q8TBP6 338 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 SSBP4Q9BWG4 385 aaPredicted RBP17.45■□□□□ 0.38
NPAS3-210ENST00000551492 ZNF286AQ9HBT8 521 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 USF3Q68DE3 2245 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 SERPINE2P07093 398 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 HLA-DRB5Q30154 266 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 TCTEX1D4Q5JR98 221 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 EAF1Q96JC9 268 aaPredicted RBP17.45■□□□□ 0.38
NPAS3-210ENST00000551492 VPS13CQ709C8 3753 aa17.45■□□□□ 0.38
NPAS3-210ENST00000551492 UQCRFS1P47985 274 aa17.44■□□□□ 0.38
NPAS3-210ENST00000551492 CDSNQ15517 529 aa17.44■□□□□ 0.38
NPAS3-210ENST00000551492 SPATA12Q7Z6I5 190 aa17.44■□□□□ 0.38
NPAS3-210ENST00000551492 LHX4Q969G2 390 aa17.44■□□□□ 0.38
NPAS3-210ENST00000551492 C18orf12Q96KH6 178 aa17.44■□□□□ 0.38
NPAS3-210ENST00000551492 PIGLQ9Y2B2 252 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms