RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 SRRM4A7MD48 611 aaKnown RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 BUB1B-PAK6H3BSN5 160 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 H7C2Y5 167 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 UPK2O00526 184 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 SHOXO15266 292 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 ARG1P05089 322 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 IL6RP08887 468 aaPredicted RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 MDKP21741 143 aaPredicted RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 PRTN3P24158 256 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 VDAC2P45880 294 aaPredicted RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 RAB13P51153 203 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 KRTAP10-3P60369 221 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 ARF6P62330 175 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 HBG1P69891 147 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 HBG2P69892 147 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 PRB3Q04118 309 aaPredicted RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 PAX8Q06710 450 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 AANATQ16613 207 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 SPINK9Q5DT21 86 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 PUSL1Q8N0Z8 303 aaKnown RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 PNKDQ8N490 385 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 KIR3DL3Q8N743 410 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 HSD17B11Q8NBQ5 300 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 OR4P4Q8NGL7 312 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 LHX4Q969G2 390 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 RBMXL1Q96E39 390 aaKnown RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 SAT2Q96F10 170 aaPredicted RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 HARBI1Q96MB7 349 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 TSNAXQ99598 290 aaKnown RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 SH3BGRL3Q9H299 93 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 UNKLQ9H9P5 680 aaKnown RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 TMEM14BQ9NUH8 114 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 BET1LQ9NYM9 111 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 NUP50Q9UKX7 468 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 PRNDQ9UKY0 176 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 TCF19Q9Y242 345 aa5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 STRAPQ9Y3F4 350 aaKnown RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 AMMECR1Q9Y4X0 333 aaPredicted RBP5.93□□□□□ -1.46
SMARCD1-210ENST00000551352 C15orf62A8K5M9 175 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 PMS2P5A8MQ11 134 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 ZNF705EA8MWA4 302 aaPredicted RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 LY6LH3BQJ8 138 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 ENSAO43768 121 aaKnown RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 SCAF4O95104 1147 aaKnown RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 IFNA5P01569 189 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 SAA1P0DJI8 122 aaPredicted RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 GATA3P23771 443 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 ATP6V0CP27449 155 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 MC5RP33032 325 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 HSPE1P61604 102 aaKnown RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 SLC38A11Q08AI6 406 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 HCP5Q6MZN7 132 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 C1orf122Q6ZSJ8 110 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 C9orf139Q6ZV77 190 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 HSD17B13Q7Z5P4 300 aaPredicted RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 LILRB2Q8N423 598 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 EIF4E3Q8N5X7 224 aaKnown RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 OR11H6Q8NGC7 330 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 OR4C13Q8NGP0 309 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 FLYWCH2Q96CP2 140 aaKnown RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 GNPNAT1Q96EK6 184 aaPredicted RBP5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 JMJD8Q96S16 334 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 CLCC1Q96S66 551 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 SIRT7Q9NRC8 400 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 ZNF257Q9Y2Q1 563 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 OR51B2Q9Y5P1 312 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 KPTNQ9Y664 436 aa5.92□□□□□ -1.46
SMARCD1-210ENST00000551352 TRAV40A0A0B4J280 105 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 IGHV1-3A0A0C4DH29 117 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 IGHV2-70DA0A0C4DH43 119 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 ODF3BA8MYP8 253 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 I3L521 148 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 FOXH1O75593 365 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 KBTBD11O94819 623 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 IGLV2-23P01705 113 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 FGF2P09038 288 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 MYOD1P15172 320 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 HOXA1P49639 335 aaPredicted RBP5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 RAB5CP51148 216 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 RPS16P62249 146 aaKnown RBP5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 BLOC1S1P78537 153 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 RUNX1Q01196 453 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 KLRD1Q13241 179 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 SCGB2A2Q13296 93 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 ATP6V1FQ16864 119 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 TOR2AQ5JU69 321 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 TPTE2P1Q5T6R2 138 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 PXDC1Q5TGL8 231 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 OR8G2PQ6IF36 304 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 SLC25A24Q6NUK1 477 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 BRD3OSQ6XYD6 125 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 TMEM182Q6ZP80 229 aaPredicted RBP5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 Q6ZRG5 221 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 OR4A5Q8NH83 315 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 VSTM2AQ8TAG5 236 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 TMEM167AQ8TBQ9 72 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 RPEQ96AT9 228 aa5.91□□□□□ -1.46
SMARCD1-210ENST00000551352 PINX1Q96BK5 328 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms