RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 OR1L8Q8NGR8 309 aa9.29□□□□□ -0.92
RAB5C-208ENST00000551338 RITA1Q96K30 269 aa9.29□□□□□ -0.92
RAB5C-208ENST00000551338 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
RAB5C-208ENST00000551338 NDUFA4L2Q9NRX3 87 aa9.29□□□□□ -0.92
RAB5C-208ENST00000551338 ONECUT1Q9UBC0 465 aa9.29□□□□□ -0.92
RAB5C-208ENST00000551338 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
RAB5C-208ENST00000551338 ANKHD1Q8IWZ3 2542 aaKnown RBP9.28□□□□□ -0.92
RAB5C-208ENST00000551338 IGHV1-3A0A0C4DH29 117 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 LOC105371267A0A1B0GV96 52 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 E7EUB6 86 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 LY6LH3BQJ8 138 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 HMGB3O15347 200 aaKnown RBP9.28□□□□□ -0.92
RAB5C-208ENST00000551338 SLC25A17O43808 307 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 IFNA1P01562 189 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 CRYGBP07316 175 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 GPR6P46095 362 aaPredicted RBP9.28□□□□□ -0.92
RAB5C-208ENST00000551338 CDC34P49427 236 aaPredicted RBP9.28□□□□□ -0.92
RAB5C-208ENST00000551338 ATP5IP56385 69 aaPredicted RBP9.28□□□□□ -0.92
RAB5C-208ENST00000551338 GCSAMLQ5JQS6 135 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 SOHLH1Q5JUK2 328 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 FAM90A2PQ658T7 463 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 PNKDQ8N490 385 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 RAB24Q969Q5 203 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 SSBP3Q9BWW4 388 aaPredicted RBP9.28□□□□□ -0.92
RAB5C-208ENST00000551338 COMMD5Q9GZQ3 224 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 ZNF430Q9H8G1 570 aaPredicted RBP9.28□□□□□ -0.92
RAB5C-208ENST00000551338 NPVFQ9HCQ7 196 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 BOD1L1Q8NFC6 3051 aa9.28□□□□□ -0.92
RAB5C-208ENST00000551338 A0A1W2PN81 502 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 A0A1W2PPI3 338 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 M0R1W7 72 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 SNRNP70P08621 437 aaKnown RBP9.27□□□□□ -0.93
RAB5C-208ENST00000551338 CNTFRP26992 372 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 CHRNA7P36544 502 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 AKR1C3P42330 323 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 LGALS7P47929 136 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 AKIRIN2Q53H80 203 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 LDLRAD2Q5SZI1 272 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 HCP5Q6MZN7 132 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 FAM122AQ96E09 287 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 C20orf24Q9BUV8 137 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 TMPRSS5Q9H3S3 457 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 UNKLQ9H9P5 680 aaKnown RBP9.27□□□□□ -0.93
RAB5C-208ENST00000551338 RPS10P5Q9NQ39 176 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 SIRT7Q9NRC8 400 aa9.27□□□□□ -0.93
RAB5C-208ENST00000551338 PLXNB1O43157 2135 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 LOC105371242A0A075B767 164 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 hCG_1809904A0A1W2PP81 198 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 A0A1W2PPE2 198 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 A0A1W2PR64 198 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 A0A1W2PRV1 198 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 ODF3BA8MYP8 253 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 M0R036 132 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 CYB5BO43169 146 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 ENSAO43768 121 aaKnown RBP9.26□□□□□ -0.93
RAB5C-208ENST00000551338 ARF6P62330 175 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 CD69Q07108 199 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 KLRD1Q13241 179 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 MOB3BQ86TA1 216 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 TEX45Q8NA69 505 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 OR11H6Q8NGC7 330 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 GATAD1Q8WUU5 269 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 P2RX4Q99571 388 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 KCNIP2Q9NS61 270 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 VAX2Q9UIW0 290 aa9.26□□□□□ -0.93
RAB5C-208ENST00000551338 PUS1Q9Y606 427 aaKnown RBP eCLIP9.26□□□□□ -0.93
RAB5C-208ENST00000551338 H3BQ15 152 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 IGHV2-5P01817 119 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 ATF4P18848 351 aaPredicted RBP9.25□□□□□ -0.93
RAB5C-208ENST00000551338 RPL29P47914 159 aaKnown RBP9.25□□□□□ -0.93
RAB5C-208ENST00000551338 EFNA4P52798 201 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 CEBPGP53567 150 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 ERHP84090 104 aaKnown RBP9.25□□□□□ -0.93
RAB5C-208ENST00000551338 PRR20EP86478 221 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 PRR20CP86479 221 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 PRR20DP86480 221 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 PRR20BP86481 221 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 PRR20AP86496 221 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 WT1-ASQ06250 92 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 PSG5Q15238 335 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 RHEBQ15382 184 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 TMEM249Q2WGJ8 235 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 TPTE2P1Q5T6R2 138 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 TEPPQ6URK8 271 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 TMEM144Q7Z5S9 345 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 SSMEM1Q8WWF3 244 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 RPEQ96AT9 228 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 MANBALQ9NQG1 85 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 SMCO4Q9NRQ5 59 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 INSIG2Q9Y5U4 225 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 SPTA1P02549 2419 aa9.25□□□□□ -0.93
RAB5C-208ENST00000551338 IGLC7A0M8Q6 106 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 OVOL3O00110 214 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 NDUFS6O75380 124 aaKnown RBP9.24□□□□□ -0.93
RAB5C-208ENST00000551338 LINC00869P0C866 280 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 PRTN3P24158 256 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 PAX6P26367 422 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 RPL27AP46776 148 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms