RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 DCUN1D4Q92564 292 aa13.82□□□□□ -0.2
LETMD1-220ENST00000549686 C11orf1Q9H5F2 150 aa13.82□□□□□ -0.2
LETMD1-220ENST00000549686 OR5AC2Q9NZP5 309 aa13.82□□□□□ -0.2
LETMD1-220ENST00000549686 HIVEP2P31629 2446 aa13.82□□□□□ -0.2
LETMD1-220ENST00000549686 FCN1O00602 326 aa13.81□□□□□ -0.2
LETMD1-220ENST00000549686 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-220ENST00000549686 CX3CL1P78423 397 aa13.81□□□□□ -0.2
LETMD1-220ENST00000549686 ERHP84090 104 aaKnown RBP13.81□□□□□ -0.2
LETMD1-220ENST00000549686 FXYD3Q14802 87 aa13.81□□□□□ -0.2
LETMD1-220ENST00000549686 ZNF418Q8TF45 676 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-220ENST00000549686 SRSF12Q8WXF0 261 aaKnown RBP13.81□□□□□ -0.2
LETMD1-220ENST00000549686 ARPC1AQ92747 370 aa13.81□□□□□ -0.2
LETMD1-220ENST00000549686 HINT2Q9BX68 163 aa13.81□□□□□ -0.2
LETMD1-220ENST00000549686 SLC25A31Q9H0C2 315 aa13.81□□□□□ -0.2
LETMD1-220ENST00000549686 HEYLQ9NQ87 328 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-220ENST00000549686 LYRM2Q9NU23 88 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-220ENST00000549686 U3KQ87 197 aa13.81□□□□□ -0.2
LETMD1-220ENST00000549686 CLDN34H7C241 214 aa13.8□□□□□ -0.2
LETMD1-220ENST00000549686 KCNAB3O43448 404 aa13.8□□□□□ -0.2
LETMD1-220ENST00000549686 OR2C3Q8N628 320 aa13.8□□□□□ -0.2
LETMD1-220ENST00000549686 TMEM68Q96MH6 324 aa13.8□□□□□ -0.2
LETMD1-220ENST00000549686 PSENENQ9NZ42 101 aa13.8□□□□□ -0.2
LETMD1-220ENST00000549686 TNFSF18Q9UNG2 199 aa13.8□□□□□ -0.2
LETMD1-220ENST00000549686 SVEP1Q4LDE5 3571 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 IGHV7-81A0A0B4J1V7 117 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 OPN1MWP04001 364 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 OPN1MW2P0DN77 364 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 OPN1MW3P0DN78 364 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 IAPPP10997 89 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 MYOD1P15172 320 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 HTR2BP41595 481 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 PAX9P55771 341 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 SSBP2P81877 361 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-220ENST00000549686 C10orf55Q5SWW7 151 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 ACOT7LQ6ZUV0 252 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 OR11H4Q8NGC9 324 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 AQP10Q96PS8 301 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 JMJD8Q96S16 334 aa13.79□□□□□ -0.2
LETMD1-220ENST00000549686 GSX1Q9H4S2 264 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-220ENST00000549686 STRAPQ9Y3F4 350 aaKnown RBP13.79□□□□□ -0.2
LETMD1-220ENST00000549686 CYSRT1A8MQ03 144 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 ARPC5O15511 151 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 TMEM50AO95807 157 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 AMY1AP04745 511 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 FAM157CP0CG43 387 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 CAV2P51636 162 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 BAXQ07812 192 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 OR2F1Q13607 317 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 ZNF345Q14585 488 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 SPINK9Q5DT21 86 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 NPFFR1Q9GZQ6 430 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 MFFQ9GZY8 342 aa13.78□□□□□ -0.2
LETMD1-220ENST00000549686 A0A0D9SG52 128 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 IGLC7A0M8Q6 106 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 MSGN1A6NI15 193 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 CGB1A6NKQ9 187 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 TEX22C9J3V5 150 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 INAFM1C9JVW0 142 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 BOLA2-SMG1P6H3BVE0 249 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 TSPAN9O75954 239 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 C4BPBP20851 252 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 RPL12P30050 165 aaKnown RBP13.77□□□□□ -0.21
LETMD1-220ENST00000549686 SNCAP37840 140 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 EIF2B2P49770 351 aaKnown RBP13.77□□□□□ -0.21
LETMD1-220ENST00000549686 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.212e-21■■■■■ 29
LETMD1-220ENST00000549686 RPL15P61313 204 aaKnown RBP13.77□□□□□ -0.21
LETMD1-220ENST00000549686 RAB11AP62491 216 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 ANK3Q12955 4377 aaKnown RBP13.77□□□□□ -0.21
LETMD1-220ENST00000549686 STX12Q86Y82 276 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 SLC24A4Q8NFF2 622 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 SGMS2Q8NHU3 365 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 GRPEL2Q8TAA5 225 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 ABHD5Q8WTS1 349 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 ZNF580Q9UK33 172 aa13.77□□□□□ -0.21
LETMD1-220ENST00000549686 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
LETMD1-220ENST00000549686 A0A1B0GW64 132 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 E7EUB6 86 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 CRLF1O75462 422 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 IFNA10P01566 189 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 IGHG2P01859 326 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 OR13C7P0DN81 318 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 HKR1P10072 659 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 TMEM267Q0VDI3 215 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-220ENST00000549686 BSXQ3C1V8 233 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 SPANXN5Q5MJ07 72 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 TMEM14EPQ6UXP3 125 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 TMEM252Q8N6L7 170 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 ZNF114Q8NC26 417 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 OR1L6Q8NGR2 347 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 HSPB9Q9BQS6 159 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 ZC4H2Q9NQZ6 224 aa13.76□□□□□ -0.21
LETMD1-220ENST00000549686 DNAJC9-AS1A6NH13 148 aa13.75□□□□□ -0.21
LETMD1-220ENST00000549686 CYB5BO43169 146 aa13.75□□□□□ -0.21
LETMD1-220ENST00000549686 NPY1RP25929 384 aa13.75□□□□□ -0.21
LETMD1-220ENST00000549686 SULT1A1P50225 295 aa13.75□□□□□ -0.21
LETMD1-220ENST00000549686 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
LETMD1-220ENST00000549686 HILS1P60008 231 aa13.75□□□□□ -0.21
LETMD1-220ENST00000549686 NDPQ00604 133 aa13.75□□□□□ -0.21
LETMD1-220ENST00000549686 WT1-ASQ06250 92 aa13.75□□□□□ -0.21
LETMD1-220ENST00000549686 C2orf83Q53S99 150 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms