RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RPEQ96AT9 228 aa9.65□□□□□ -0.86
CCDC38-202ENST00000546386 SAT2Q96F10 170 aaPredicted RBP9.65□□□□□ -0.86
CCDC38-202ENST00000546386 ACY3Q96HD9 319 aa9.65□□□□□ -0.86
CCDC38-202ENST00000546386 NPCDR1Q9BY65 106 aa9.65□□□□□ -0.86
CCDC38-202ENST00000546386 AURKAIP1Q9NWT8 199 aaPredicted RBP9.65□□□□□ -0.86
CCDC38-202ENST00000546386 BUB1B-PAK6H3BSN5 160 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 TIMM23O14925 209 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 DFFBO76075 338 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 HRASP01112 189 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 SNRNP70P08621 437 aaKnown RBP9.65□□□□□ -0.87
CCDC38-202ENST00000546386 PLGLAQ15195 96 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 KIR3DL3Q8N743 410 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 COMMD5Q9GZQ3 224 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 LINC00574Q9H8X3 128 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 ENY2Q9NPA8 101 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 TMEM14BQ9NUH8 114 aa9.65□□□□□ -0.87
CCDC38-202ENST00000546386 M0R036 132 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 IGHV4-39P01824 125 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 AREGP15514 252 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 HSPE1P61604 102 aaKnown RBP9.64□□□□□ -0.87
CCDC38-202ENST00000546386 WT1-ASQ06250 92 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 TNXAQ16473 311 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 KLF17Q5JT82 389 aaPredicted RBP9.64□□□□□ -0.87
CCDC38-202ENST00000546386 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 SLC24A4Q8NFF2 622 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 OR4P4Q8NGL7 312 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 SUN5Q8TC36 379 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 C22orf15Q8WYQ4 148 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 CHODLQ9H9P2 273 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 MED9Q9NWA0 146 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 DOK5Q9P104 306 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 IGHV1-3A0A0C4DH29 117 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 KBTBD11O94819 623 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 IGFBP2P18065 325 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 AGAP20933 346 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC38-202ENST00000546386 HLA-DRB5Q30154 266 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 SPATA31B1PQ5VZV4 182 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 OR5T1Q8NG75 326 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 OR5AN1Q8NGI8 311 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 C1orf159Q96HA4 380 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 SCRT1Q9BWW7 348 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 NKX6-2Q9C056 277 aaPredicted RBP9.64□□□□□ -0.87
CCDC38-202ENST00000546386 PLEKHA3Q9HB20 300 aa9.64□□□□□ -0.87
CCDC38-202ENST00000546386 IGKV1OR2-108A0A075B7D4 117 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 UPK2O00526 184 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 NDUFA2O43678 99 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 LIPFP07098 398 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 MMP9P14780 707 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 NPY1RP25929 384 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 RPL8P62917 257 aaKnown RBP9.63□□□□□ -0.87
CCDC38-202ENST00000546386 SSX8Q7RTT4 187 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 VMO1Q7Z5L0 202 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF843Q8N446 348 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 CYB561D1Q8N8Q1 229 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 OR10G4Q8NGN3 311 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 OR10G9Q8NGN4 311 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 OR10G7Q8NGN6 311 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 OR4C13Q8NGP0 309 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 GNPNAT1Q96EK6 184 aaPredicted RBP9.63□□□□□ -0.87
CCDC38-202ENST00000546386 CLEC7AQ9BXN2 247 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 MRPL36Q9P0J6 103 aaKnown RBP9.63□□□□□ -0.87
CCDC38-202ENST00000546386 RAB19A4D1S5 217 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 IGLV1-47P01700 117 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 IGLV2-23P01705 113 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 CD5P06127 495 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF674Q2M3X9 581 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 EIF4E3Q8N5X7 224 aaKnown RBP9.63□□□□□ -0.87
CCDC38-202ENST00000546386 FAM216AQ8WUB2 273 aa9.63□□□□□ -0.87
CCDC38-202ENST00000546386 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 NCBP2LA6PVI3 153 aaKnown RBP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 FAM90A26D6RGX4 464 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 FOXH1O75593 365 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 ATF4P18848 351 aaPredicted RBP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 DVL1P1P54792 670 aaPredicted RBP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 ASPHD1Q5U4P2 390 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 BRD3OSQ6XYD6 125 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF709Q8N972 641 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 MGST2Q99735 147 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 SEBOXQ9HB31 216 aaPredicted RBP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 RAB9BQ9NP90 201 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 SLC39A9Q9NUM3 307 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 MIOXQ9UGB7 285 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 FLNBO75369 2602 aaKnown RBP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF727A8MUV8 499 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 UMAD1C9J7I0 102 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 RBFOX2O43251 390 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 KRTAP10-9P60411 292 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 RAB11AP62491 216 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 DTX2Q86UW9 622 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 MISP3Q96FF7 219 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 SEPSECSQ9HD40 501 aaKnown RBP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 METTL1Q9UBP6 276 aaKnown RBP9.62□□□□□ -0.87
CCDC38-202ENST00000546386 GAB2Q9UQC2 676 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 WASHC3Q9Y3C0 194 aa9.62□□□□□ -0.87
CCDC38-202ENST00000546386 MAP1LC3B2A6NCE7 125 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 MMDQ15546 238 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms