RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 APOA2P02652 100 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 TRGV3P03979 118 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 SPNP16150 400 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 TALDO1P37837 337 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 OR2B8PP59922 312 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 WT1-ASQ06250 92 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 ZNF616Q08AN1 781 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 CDK10Q15131 360 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 PLGLAQ15195 96 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 SPINK9Q5DT21 86 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 LHFPL1Q86WI0 220 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 CLVS1Q8IUQ0 354 aaPredicted RBP4.76□□□□□ -1.65
LDHC-209ENST00000545848 POC5Q8NA72 575 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 OR1N2Q8NGR9 330 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 FCAMRQ8WWV6 532 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 ACOT12Q8WYK0 555 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 UBE2E2Q96LR5 201 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 ASCL2Q99929 193 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 ZNF2Q9BSG1 426 aaPredicted RBP4.76□□□□□ -1.65
LDHC-209ENST00000545848 THAP7Q9BT49 309 aaPredicted RBP4.76□□□□□ -1.65
LDHC-209ENST00000545848 ZFP57Q9NU63 452 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 MRPL36Q9P0J6 103 aaKnown RBP4.76□□□□□ -1.65
LDHC-209ENST00000545848 MGAT4AQ9UM21 535 aa4.76□□□□□ -1.65
LDHC-209ENST00000545848 MRPS7Q9Y2R9 242 aaKnown RBP4.76□□□□□ -1.65
LDHC-209ENST00000545848 PGLYRP1O75594 196 aaPredicted RBP4.75□□□□□ -1.65
LDHC-209ENST00000545848 RBBP9O75884 186 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 OR2J3O76001 311 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 IGKV1-5P01602 117 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 APOA1P02647 267 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 CD3DP04234 171 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 P0C879 139 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 MC5RP33032 325 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 G6PCP35575 357 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 PPP5CP53041 499 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 ARPC4P59998 168 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 SLC35B1P78383 322 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 ZNF79Q15937 498 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 AKIRIN2Q53H80 203 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 ACSM6Q6P461 480 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 UNQ9165/PRO28630Q6UXU0 137 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 GSG1LQ6UXU4 331 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 FAM219AQ8IW50 185 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 SPAG16Q8N0X2 631 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 OR13C8Q8NGS7 320 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 TMEM167AQ8TBQ9 72 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 TMEM230Q96A57 120 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 ISOC1Q96CN7 298 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 TP53RKQ96S44 253 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 TSNAXQ99598 290 aaKnown RBP4.75□□□□□ -1.65
LDHC-209ENST00000545848 RAB9BQ9NP90 201 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 VSIG4Q9Y279 399 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 RBM7Q9Y580 266 aaKnown RBP4.75□□□□□ -1.65
LDHC-209ENST00000545848 V9GYH0 126 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 AGRNO00468 2067 aa4.75□□□□□ -1.65
LDHC-209ENST00000545848 IGLV11-55A0A075B6I3 123 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 TRGV11A0A075B6L2 103 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 IGHV3OR16-8A0A075B7F1 116 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 A0A0A6YYH2 397 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 IGHV3-35A0A0C4DH35 117 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 A6NJ64 397 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 LINC01619G3V211 115 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 UPK2O00526 184 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 SCGB1D1O95968 90 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 IGHV3-48P01763 117 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 CSN3P07498 182 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 ZNF182P17025 639 aaPredicted RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 CTRB1P17538 263 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 SYNJ2BPP57105 145 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 MRPS15P82914 257 aaKnown RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 RHOGP84095 191 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 RELQ04864 619 aaPredicted RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 EXOSC2Q13868 293 aaKnown RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 POU2AF1Q16633 256 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 SP6Q3SY56 376 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 CTRB2Q6GPI1 263 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 ZNF343Q6P1L6 599 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 DHRS11Q6UWP2 260 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 COMMD1Q8N668 190 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 TEX45Q8NA69 505 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 OSR1Q8TAX0 266 aaPredicted RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 FYTTD1Q96QD9 318 aaKnown RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 SDHCQ99643 169 aaPredicted RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 RNF5Q99942 180 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 SOSTQ9BQB4 213 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 NXF2Q9GZY0 626 aaKnown RBP4.74□□□□□ -1.65
LDHC-209ENST00000545848 RETNQ9HD89 108 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 IFT46Q9NQC8 304 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 COA4Q9NYJ1 87 aa4.74□□□□□ -1.65
LDHC-209ENST00000545848 TEX50A0A1B0GTY4 177 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 H3BUI4 141 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 UBE2CO00762 179 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 OVOL1O14753 267 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 OR2A4O95047 310 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 CNIH1O95406 144 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 CD74P04233 296 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 PRSS3P35030 304 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 LPAR6P43657 344 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 RPL27AP46776 148 aaKnown RBP4.73□□□□□ -1.65
LDHC-209ENST00000545848 PITPNAQ00169 270 aa4.73□□□□□ -1.65
LDHC-209ENST00000545848 KLF5Q13887 457 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms