RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CRHBPP24387 322 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 GADD45AP24522 165 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 THOC7Q6I9Y2 204 aaKnown RBP10.66□□□□□ -0.7
RTN3-214ENST00000545432 Q6ZR54 194 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 DHRSXQ8N5I4 330 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 GDPD1Q8N9F7 314 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 TCTEX1D2Q8WW35 142 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 HERC1Q15751 4861 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 TRAV3A0A0B4J244 114 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 J3QRK9 145 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 UPK2O00526 184 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 CA1P00915 261 aaPredicted RBP10.65□□□□□ -0.7
RTN3-214ENST00000545432 SERPINE2P07093 398 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 P0DMU3 169 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 FAM231AP0DMU4 169 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 FAM231CP0DMU5 169 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 Q6ZTC4 211 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 PACRGLQ8N7B6 248 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 BPIFB6Q8NFQ5 453 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 DCSTAMPQ9H295 470 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 C8orf4Q9NR00 106 aa10.65□□□□□ -0.7
RTN3-214ENST00000545432 ELF5Q9UKW6 265 aaPredicted RBP10.65□□□□□ -0.7
RTN3-214ENST00000545432 IGHV4-28A0A0C4DH34 117 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 K7EIM0 57 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 DFFBO76075 338 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 GNAO1P09471 354 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 MIFP14174 115 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 TAS2R31P59538 309 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 WT1-ASQ06250 92 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 ARL6IP1Q15041 203 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 TRAM1Q15629 374 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 CNIH2Q6PI25 160 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 ZNF773Q6PK81 442 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 HSD17B13Q7Z5P4 300 aaPredicted RBP10.64□□□□□ -0.71
RTN3-214ENST00000545432 CADM3Q8N126 398 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 OR10W1Q8NGF6 305 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 SCARB1Q8WTV0 552 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 TMEM203Q969S6 136 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 DGCR14Q96DF8 476 aaKnown RBP10.64□□□□□ -0.71
RTN3-214ENST00000545432 C21orf62Q9NYP8 219 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 SPATA2Q9UM82 520 aa10.64□□□□□ -0.71
RTN3-214ENST00000545432 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
RTN3-214ENST00000545432 TRAV2A0A0B4J234 112 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 CYB5BO43169 146 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
RTN3-214ENST00000545432 CD5P06127 495 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 PSMA1P25786 263 aaKnown RBP10.63□□□□□ -0.71
RTN3-214ENST00000545432 TALDO1P37837 337 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 TMEM41BQ5BJD5 291 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 LIPKQ5VXJ0 399 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 ZNF575Q86XF7 245 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 C8orf59Q8N0T1 100 aaPredicted RBP10.63□□□□□ -0.71
RTN3-214ENST00000545432 TMEM116Q8NCL8 245 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 C20orf24Q9BUV8 137 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 QTRT1Q9BXR0 403 aaKnown RBP10.63□□□□□ -0.71
RTN3-214ENST00000545432 F11RQ9Y624 299 aaKnown RBP10.63□□□□□ -0.71
RTN3-214ENST00000545432 X6R8D5 127 aa10.63□□□□□ -0.71
RTN3-214ENST00000545432 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 HPRT1P00492 218 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 CD74P04233 296 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 NQO2P16083 231 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 RPS25P62851 125 aaKnown RBP10.62□□□□□ -0.71
RTN3-214ENST00000545432 SLC25A24Q6NUK1 477 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 ZBTB34Q8NCN2 500 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 UFD1Q92890 307 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 COMMD5Q9GZQ3 224 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 NDUFA4L2Q9NRX3 87 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 TAS2R8Q9NYW2 309 aa10.62□□□□□ -0.71
RTN3-214ENST00000545432 IGHV3OR16-8A0A075B7F1 116 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 TEX50A0A1B0GTY4 177 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 METTL21EPA6NDL7 271 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 TRAPPC2P0DI81 140 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 TRAPPC2BP0DI82 140 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 OR13C7P0DN81 318 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 CALRP27797 417 aaKnown RBP10.61□□□□□ -0.71
RTN3-214ENST00000545432 CDNFQ49AH0 187 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 HES5Q5TA89 166 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 HACD4Q5VWC8 232 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 SPAG16Q8N0X2 631 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 CSNK1G2-AS1Q8NCQ2 148 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 GPHA2Q96T91 129 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 VSIRQ9H7M9 311 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 HRASLSQ9HDD0 168 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 AGRNO00468 2067 aa10.61□□□□□ -0.71
RTN3-214ENST00000545432 A0A075B6Q4 140 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 TRAV1-2A0A0B4J238 106 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 IFITM5A6NNB3 132 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 TFPI2P48307 235 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 PAFAH1B2P68402 229 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 FABP5Q01469 135 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
RTN3-214ENST00000545432 C12orf74Q32Q52 190 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
RTN3-214ENST00000545432 LILRB2Q8N423 598 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 GIMAP1Q8WWP7 306 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 PLEKHA2Q9HB19 425 aa10.6□□□□□ -0.71
RTN3-214ENST00000545432 TRAV14DV4A0A0A6YYC5 116 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 M0R2N4 97 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms