RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 Q9H3A6 140 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 STARD6P59095 220 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 LAMTOR2Q9Y2Q5 125 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 IGHV3-64A0A075B6Q5 118 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 TRAV2A0A0B4J234 112 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 IZUMO1RA6ND01 250 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 NRN1Q9NPD7 142 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 SMCHD1A6NHR9 2005 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 A6NNC1 897 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 FTH1P19P0C7X4 201 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 MALP21145 153 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 SRSF3P84103 164 aaKnown RBP13.06□□□□□ -0.32
CHD4-210ENST00000544040 VKORC1Q9BQB6 163 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 CARHSP1Q9Y2V2 147 aaKnown RBP13.06□□□□□ -0.32
CHD4-210ENST00000544040 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 TMEM54Q969K7 222 aa13.06□□□□□ -0.32
CHD4-210ENST00000544040 PDLIM4P50479 330 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 MYO7AQ13402 2215 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 TRAV8-4A0A0B4J246 113 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 EVI2AP22794 236 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 ITGB4P16144 1822 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 A0A0U1RRA0 63 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 ORMDL3Q8N138 153 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 COX6A1P12074 109 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 LINC01590Q5TEZ4 76 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 SMRP1Q8NCR6 262 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 FGF11Q92914 225 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 C5orf30Q96GV9 206 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 TEX29Q8N6K0 151 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 ELOVL5Q9NYP7 299 aa13.05□□□□□ -0.32
CHD4-210ENST00000544040 KIAA1551Q9HCM1 1747 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 TRGV2A0A075B6R0 118 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 C12orf77C9JDV5 145 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
CHD4-210ENST00000544040 SDF2L1Q9HCN8 221 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 IGHV3-11P01762 117 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 SRSF4Q08170 494 aaKnown RBP13.04□□□□□ -0.32
CHD4-210ENST00000544040 FBLN7Q53RD9 439 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 PRR31Q5SQ13 230 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 ACP7Q6ZNF0 438 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 HS3ST3B1Q9Y662 390 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 NPC2P61916 151 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 NUTF2P61970 127 aaKnown RBP13.04□□□□□ -0.32
CHD4-210ENST00000544040 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
CHD4-210ENST00000544040 SPSB2Q99619 263 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 WFDC12Q8WWY7 111 aa13.04□□□□□ -0.32
CHD4-210ENST00000544040 CITED2Q99967 270 aaPredicted RBP13.04□□□□□ -0.32
CHD4-210ENST00000544040 SCN7AQ01118 1682 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 C1QTNF9P0C862 333 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 PPIFP30405 207 aaKnown RBP13.03□□□□□ -0.32
CHD4-210ENST00000544040 PRDM13Q9H4Q3 707 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 ZNF257Q9Y2Q1 563 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 TRPM6Q9BX84 2022 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 SHISA3A0PJX4 238 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 SLC25A45Q8N413 288 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 OR13A1Q8NGR1 328 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 MIA3Q5JRA6 1907 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 IGHMP01871 453 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 RPL23P62829 140 aaKnown RBP13.03□□□□□ -0.32
CHD4-210ENST00000544040 EGR4Q05215 589 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 PPP1R27Q86WC6 154 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 DEFB104AQ8WTQ1 72 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 GDF15Q99988 308 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
CHD4-210ENST00000544040 MRPL20Q9BYC9 149 aaKnown RBP13.03□□□□□ -0.32
CHD4-210ENST00000544040 HOXA3O43365 443 aaPredicted RBP13.02□□□□□ -0.32
CHD4-210ENST00000544040 FHL5Q5TD97 284 aa13.02□□□□□ -0.32
CHD4-210ENST00000544040 LHFPL4Q7Z7J7 247 aa13.02□□□□□ -0.32
CHD4-210ENST00000544040 FAM216BQ8N7L0 139 aa13.02□□□□□ -0.32
CHD4-210ENST00000544040 COQ2Q96H96 371 aa13.02□□□□□ -0.32
CHD4-210ENST00000544040 DOCK1Q14185 1865 aa13.02□□□□□ -0.32
CHD4-210ENST00000544040 LAIR2Q6ISS4 152 aa13.02□□□□□ -0.32
CHD4-210ENST00000544040 PRR32B1ATL7 298 aa13.02□□□□□ -0.33
CHD4-210ENST00000544040 CD7P09564 240 aa13.02□□□□□ -0.33
CHD4-210ENST00000544040 SLC25A20O43772 301 aa13.02□□□□□ -0.33
CHD4-210ENST00000544040 C21orf62Q9NYP8 219 aa13.02□□□□□ -0.33
CHD4-210ENST00000544040 KNTC1P50748 2209 aa13.02□□□□□ -0.33
CHD4-210ENST00000544040 KNL1Q8NG31 2342 aa13.02□□□□□ -0.33
CHD4-210ENST00000544040 SCN9AQ15858 1988 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 OR2K2Q8NGT1 345 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 VCX2Q9H322 139 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 SLC25A15Q9Y619 301 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 TMEM42Q69YG0 159 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 C1QL4Q86Z23 238 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 FAM181AQ8N9Y4 354 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 LDLRAD2Q5SZI1 272 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 IGKV1D-43A0A0B4J1Z2 117 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 PCOLCEQ15113 449 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 C19orf48Q6RUI8 117 aa13.01□□□□□ -0.33
CHD4-210ENST00000544040 CELA3AP09093 270 aa13□□□□□ -0.33
CHD4-210ENST00000544040 DNAJC13O75165 2243 aa13□□□□□ -0.33
CHD4-210ENST00000544040 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
CHD4-210ENST00000544040 A8MXK9 166 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms