RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 OR1S1Q8NH92 325 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 LHFPL5Q8TAF8 219 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 FAM110DQ8TAY7 271 aaPredicted RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 LSM10Q969L4 123 aaKnown RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 GPR146Q96CH1 333 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 SLA2Q9H6Q3 261 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 PLEKHA3Q9HB20 300 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 GPN1Q9HCN4 374 aaPredicted RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 ZFP57Q9NU63 452 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 CACNG5Q9UF02 275 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 SHPKQ9UHJ6 478 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 ZNF580Q9UK33 172 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 TMEM56-RWDD3S4R434 201 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 A0A0G2JLM5 398 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 A0A0G2JRQ6 117 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 FAM25EA8MYX2 175 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 TEX22C9J3V5 150 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 INMT-MINDY4F8WBC2 141 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 ST8SIA3O43173 380 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 DUS4LO95620 317 aaKnown RBP4.94□□□□□ -1.62
LTBR-212ENST00000543542 IGLV1-40P01703 118 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 PF4P02776 101 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 PRH1P02810 166 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 OR13C7P0DN81 318 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 AREGP15514 252 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 PSMB6P28072 239 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 PPIFP30405 207 aaKnown RBP4.94□□□□□ -1.62
LTBR-212ENST00000543542 SNCAP37840 140 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 RAB9AP51151 201 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 HSPE1P61604 102 aaKnown RBP4.94□□□□□ -1.62
LTBR-212ENST00000543542 RPL23AP62750 156 aaKnown RBP4.94□□□□□ -1.62
LTBR-212ENST00000543542 SSBP2P81877 361 aaPredicted RBP4.94□□□□□ -1.62
LTBR-212ENST00000543542 CD83Q01151 205 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 CFHR3Q02985 330 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 DHRS2Q13268 280 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 DCTN2Q13561 401 aaKnown RBP4.94□□□□□ -1.62
LTBR-212ENST00000543542 SMCO1Q147U7 214 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 ANKRD55Q3KP44 614 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 SLC25A24Q6NUK1 477 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 HSD17B13Q7Z5P4 300 aaPredicted RBP4.94□□□□□ -1.62
LTBR-212ENST00000543542 TTC9CQ8N5M4 171 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 MINDY2Q8NBR6 621 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 OR4F17Q8NGA8 305 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 OR10W1Q8NGF6 305 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 OR52B4Q8NGK2 314 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 OR5B12Q96R08 314 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 OR4F4Q96R69 305 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 SEC22CQ9BRL7 303 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 TMEM14BQ9NUH8 114 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 ZNF257Q9Y2Q1 563 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 TMED3Q9Y3Q3 217 aa4.94□□□□□ -1.62
LTBR-212ENST00000543542 A0A0B4J293 547 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 DBX1A6NMT0 343 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 NPIPB5A8MRT5 1133 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 E7EUB6 86 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 H3BUA1 57 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 WRBO00258 174 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 SOX15O60248 233 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 PRAF2O60831 178 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 ADAP1O75689 374 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 OR2J3O76001 311 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 SCGB1D2O95969 90 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 PTTG1O95997 202 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 IGHV3-11P01762 117 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 HIST1H1BP16401 226 aaKnown RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 PSMB8P28062 276 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 CDX1P47902 265 aaPredicted RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 SUB1P53999 127 aaKnown RBP eCLIP4.93□□□□□ -1.62
LTBR-212ENST00000543542 SPCS3P61009 180 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 RHOGP84095 191 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 PRCDQ00LT1 54 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 DEFA5Q01523 94 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 ATP5G2Q06055 141 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 TCTEX1D4Q5JR98 221 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 ASPHD1Q5U4P2 390 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 GGNBP1Q5YKI7 109 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 C8orf86Q6ZUL3 223 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 ZNF429Q86V71 674 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 CADM3Q8N126 398 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 C12orf45Q8N5I9 185 aaPredicted RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 LRTM2Q8N967 370 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 DUSP18Q8NEJ0 188 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 ZNF431Q8TF32 576 aaPredicted RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 WIPF2Q8TF74 440 aaPredicted RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 DPF1Q92782 380 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 UBE2E2Q96LR5 201 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 SRSF8Q9BRL6 282 aaKnown RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 ALX4Q9H161 411 aaPredicted RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 KLK15Q9H2R5 256 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 HIPK2Q9H2X6 1198 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 PALMDQ9NP74 551 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 HEYLQ9NQ87 328 aaPredicted RBP4.93□□□□□ -1.62
LTBR-212ENST00000543542 NDUFA4L2Q9NRX3 87 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 THYN1Q9P016 225 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 CACFD1Q9UGQ2 172 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 FBXL7Q9UJT9 491 aa4.93□□□□□ -1.62
LTBR-212ENST00000543542 ATRQ13535 2644 aa4.92□□□□□ -1.62
LTBR-212ENST00000543542 A0A1B0GU03 582 aa4.92□□□□□ -1.62
LTBR-212ENST00000543542 A0A1B0GW64 132 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms