RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MIOXQ9UGB7 285 aa11.45□□□□□ -0.58
LDB3-207ENST00000542786 E7EUB6 86 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 M0R036 132 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 NDUFS6O75380 124 aaKnown RBP11.44□□□□□ -0.58
LDB3-207ENST00000542786 USF1P22415 310 aaPredicted RBP11.44□□□□□ -0.58
LDB3-207ENST00000542786 RAB13P51153 203 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 CD81P60033 236 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 RPL8P62917 257 aaKnown RBP11.44□□□□□ -0.58
LDB3-207ENST00000542786 ACOT6Q3I5F7 207 aaPredicted RBP11.44□□□□□ -0.58
LDB3-207ENST00000542786 BEND2Q8NDZ0 799 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 OR8B3Q8NGG8 313 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 OR1L8Q8NGR8 309 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 OR8B2Q96RD0 313 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 P2RX4Q99571 388 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 HINT2Q9BX68 163 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
LDB3-207ENST00000542786 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 SMCO3A2RU48 225 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
LDB3-207ENST00000542786 OPN1MWP04001 364 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 OPN1MW2P0DN77 364 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 OPN1MW3P0DN78 364 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 AGAP20933 346 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 IL3RAP26951 378 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 MC5RP33032 325 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 PRB3Q04118 309 aaPredicted RBP11.44□□□□□ -0.58
LDB3-207ENST00000542786 MIC13Q5XKP0 118 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 OR10W1Q8NGF6 305 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 RAB1CQ92928 201 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 NPVFQ9HCQ7 196 aa11.44□□□□□ -0.58
LDB3-207ENST00000542786 IFNA1P01562 189 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 CRYGBP07316 175 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 GNLYP22749 145 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 CDC34P49427 236 aaPredicted RBP11.43□□□□□ -0.58
LDB3-207ENST00000542786 AKIRIN2Q53H80 203 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 SLC35E3Q7Z769 313 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 C15orf54Q8N8G6 183 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 OR4P4Q8NGL7 312 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 ZNF430Q9H8G1 570 aaPredicted RBP11.43□□□□□ -0.58
LDB3-207ENST00000542786 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 PXMP4Q9Y6I8 212 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 RELNP78509 3460 aa11.43□□□□□ -0.58
LDB3-207ENST00000542786 BUB1B-PAK6H3BSN5 160 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 CYB5BO43169 146 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 IGFBP2P18065 325 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 VSTM2AQ8TAG5 236 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 GATAD1Q8WUU5 269 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 HIST1H2BAQ96A08 127 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 C19orf84I3L1E1 186 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 LINC00869P0C866 280 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 FOLR2P14207 255 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 PRRX1P54821 245 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 PRR20EP86478 221 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 PRR20CP86479 221 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 PRR20DP86480 221 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 PRR20BP86481 221 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 PRR20AP86496 221 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 TEPPQ6URK8 271 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 RBMS3Q6XE24 437 aaKnown RBP11.42□□□□□ -0.58
LDB3-207ENST00000542786 MOB3BQ86TA1 216 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
LDB3-207ENST00000542786 PATZ1Q9HBE1 687 aaKnown RBP11.42□□□□□ -0.58
LDB3-207ENST00000542786 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 A0A087WWC5 75 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 A0A1W2PPH5 198 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 A6NNC1 897 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 MAS1LP35410 378 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 TAGLN2P37802 199 aaKnown RBP11.41□□□□□ -0.58
LDB3-207ENST00000542786 RPL29P47914 159 aaKnown RBP11.41□□□□□ -0.58
LDB3-207ENST00000542786 LGALS7P47929 136 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
LDB3-207ENST00000542786 WT1-ASQ06250 92 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 TVP23CQ96ET8 276 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 TIMD4Q96H15 378 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 KCNIP2Q9NS61 270 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 SLC45A2Q9UMX9 530 aa11.41□□□□□ -0.58
LDB3-207ENST00000542786 IGHV3-72A0A0B4J1Y9 119 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 IGHV1-3A0A0C4DH29 117 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 A0A1W2PPE2 198 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 SLC25A17O43808 307 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 CRYBA1P05813 215 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 LIPFP07098 398 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 CEBPGP53567 150 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 PVRIGQ6DKI7 326 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 HCP5Q6MZN7 132 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 TMEM144Q7Z5S9 345 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 STPG3Q8N7X2 389 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 SSMEM1Q8WWF3 244 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
LDB3-207ENST00000542786 A0A1W2PPI3 338 aa11.4□□□□□ -0.59
LDB3-207ENST00000542786 COX7A1P24310 79 aa11.4□□□□□ -0.59
LDB3-207ENST00000542786 VMA21Q3ZAQ7 101 aa11.4□□□□□ -0.59
LDB3-207ENST00000542786 TEX45Q8NA69 505 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms