RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 TLE4Q04727 773 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 TMEM41BQ5BJD5 291 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 FFAR4Q5NUL3 377 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 HCP5Q6MZN7 132 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 FAM71F2Q6NXP2 309 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 TMEM88Q6PEY1 159 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 NKX6-2Q9C056 277 aaPredicted RBP13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 PLEKHA3Q9HB20 300 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 INSIG2Q9Y5U4 225 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 ABCA12Q86UK0 2595 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 APELAP0DMC3 54 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 LCN2P80188 198 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 CENPVQ7Z7K6 275 aaPredicted RBP13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 BPESC1Q9GZL8 116 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 TMPRSS5Q9H3S3 457 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 SLC25A22Q9H936 323 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 ENY2Q9NPA8 101 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 WDR83OSQ9Y284 106 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 HILPDAQ9Y5L2 63 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 PTPN13Q12923 2485 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 USP9YO00507 2555 aaPredicted RBP13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 RBFOX3A6NFN3 312 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 COMMD1Q8N668 190 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 NDUFA4L2Q9NRX3 87 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 ZNF257Q9Y2Q1 563 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 NBPF19A0A087WUL8 3843 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 DNASE2O00115 360 aaPredicted RBP13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 C19orf35Q6ZS72 473 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 BEND2Q8NDZ0 799 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 CLDND2Q8NHS1 167 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 C17orf50Q8WW18 174 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 MGST2Q99735 147 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 COMMD5Q9GZQ3 224 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 GNG13Q9P2W3 67 aa13.89□□□□□ -0.19
TMEM50B-210ENST00000542230 A0A1W2PPH5 198 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 IGHV4-39P01824 125 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 WT1-ASQ06250 92 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 PEA15Q15121 130 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 SVBPQ8N300 66 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 TMEM167AQ8TBQ9 72 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 RXFP4Q8TDU9 374 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 PCGF1Q9BSM1 259 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 OVOL3O00110 214 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 REG1AP05451 166 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 IL3RAP26951 378 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 AKR1C3P42330 323 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 CEBPGP53567 150 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 RPP30P78346 268 aaKnown RBP13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 ICAM4Q14773 271 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 AKIRIN2Q53H80 203 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 ZNF787Q6DD87 383 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 SUN5Q8TC36 379 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 SSMEM1Q8WWF3 244 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 TNFRSF14Q92956 283 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 RPEQ96AT9 228 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 KIAA1456Q9P272 454 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 TIMM9Q9Y5J7 89 aa13.88□□□□□ -0.19
TMEM50B-210ENST00000542230 ZFP92A6NM28 416 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 IGHV3-48P01763 117 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 RBP4P02753 201 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 RAB11AP62491 216 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 MIC13Q5XKP0 118 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 DPPA3Q6W0C5 159 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 CBLN2Q8IUK8 224 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 OR10G4Q8NGN3 311 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 OR10G9Q8NGN4 311 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 OR10G7Q8NGN6 311 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 NRGNQ92686 78 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 C20orf24Q9BUV8 137 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 A0A1W2PPI3 338 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 MAP1LC3B2A6NCE7 125 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 IGHV2-5P01817 119 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 RNASE2P10153 161 aaKnown RBP13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 MC5RP33032 325 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 RAB13P51153 203 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 FAM122CQ6P4D5 195 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 ZNF843Q8N446 348 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 LFNGQ8NES3 379 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 OR5B3Q8NH48 314 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 GATAD1Q8WUU5 269 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 MBD3L1Q8WWY6 194 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 MAP1LC3BQ9GZQ8 125 aa13.87□□□□□ -0.19
TMEM50B-210ENST00000542230 ZANQ9Y493 2812 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 TIMM23O14925 209 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 YIF1AO95070 293 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 USF1P22415 310 aaPredicted RBP13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 PBDC1Q9BVG4 233 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 LPAR2Q9HBW0 351 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 TRAV1-1A0A0B4J248 108 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 TSPAN4O14817 238 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 SCAF4O95104 1147 aaKnown RBP13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 LGALS4P56470 323 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 DYNAPQ8N1N2 210 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 OR1L8Q8NGR8 309 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 SLC35B3Q9H1N7 401 aa13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 LSM4Q9Y4Z0 139 aaKnown RBP13.86□□□□□ -0.19
TMEM50B-210ENST00000542230 IGKV1OR2-108A0A075B7D4 117 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 hCG_1809904A0A1W2PP81 198 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms