RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 CSPG4Q6UVK1 2322 aa6.26□□□□□ -1.41
AC005840.3-201ENST00000541888 ACANP16112 2415 aa6.26□□□□□ -1.41
AC005840.3-201ENST00000541888 A0A087WWC5 75 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 TRAV3A0A0B4J244 114 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 M0R036 132 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CDS2O95674 445 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 LIPFP07098 398 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 UCP1P25874 307 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 SNCAP37840 140 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 OR2B8PP59922 312 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 RND3P61587 244 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 RPS16P62249 146 aaKnown RBP6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CLINT1Q14677 625 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 GUK1Q16774 197 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CXorf66Q5JRM2 361 aaPredicted RBP6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 LGI3Q8N145 548 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 RAB24Q969Q5 203 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 RITA1Q96K30 269 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 C2orf50Q96LR7 162 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 NOL4LQ96MY1 436 aaPredicted RBP6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 LINC00574Q9H8X3 128 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 FAM212BQ9NTI7 297 aaPredicted RBP6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 OTOGQ6ZRI0 2925 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 BTBD17A6NE02 478 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CXorf65A6NEN9 183 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 MSGN1A6NI15 193 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 C9JQL5 133 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 H3BP45 60 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 RAB29O14966 203 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 MBPP02686 304 aaPredicted RBP6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 OPN1MWP04001 364 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 ARG1P05089 322 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 SEC11BP0C7V7 166 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CT45A6P0DMU7 189 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CT45A5P0DMU8 189 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CT45A7P0DMV0 189 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 OPN1MW2P0DN77 364 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 OPN1MW3P0DN78 364 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 PAX2Q02962 417 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 RUSC1-AS1Q66K80 236 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 HCP5Q6MZN7 132 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 DYNAPQ8N1N2 210 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 LY6G5BQ8NDX9 201 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 BEND2Q8NDZ0 799 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 LHX4Q969G2 390 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 GPR146Q96CH1 333 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 NEU1Q99519 415 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 ARV1Q9H2C2 271 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 LIN7CQ9NUP9 197 aaKnown RBP6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 CACNG5Q9UF02 275 aa6.25□□□□□ -1.41
AC005840.3-201ENST00000541888 NAV3Q8IVL0 2385 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 NOTCH2Q04721 2471 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 A0A087X0M5 115 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 A0A1B0GX30 115 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 VWC2LB2RUY7 222 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 UMAD1C9J7I0 102 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 PPP1R2P9O14990 202 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 SSSCA1O60232 199 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 OR9G9P0C7N8 305 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 CNTFRP26992 372 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 IL15RAQ13261 267 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 AKIRIN2Q53H80 203 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 NMSQ5H8A3 153 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 Q5PR19 223 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 ETV3LQ6ZN32 361 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 CIARTQ8N365 385 aaPredicted RBP6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 FAM24BQ8N5W8 94 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 UBAC2Q8NBM4 344 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 OR4P4Q8NGL7 312 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 BSCL2Q96G97 398 aaPredicted RBP6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 RCC1LQ96I51 464 aaKnown RBP6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 TMEM56Q96MV1 263 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 SLC35B3Q9H1N7 401 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 NCOR1P1Q9H4R4 102 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 PLEKHA2Q9HB19 425 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 TMEM56-RWDD3S4R434 201 aa6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 SONP18583 2426 aaKnown RBP6.24□□□□□ -1.41
AC005840.3-201ENST00000541888 MYO9AB2RTY4 2548 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 BORCS7-ASMTA0A0B4J1R7 106 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 IGHV2-70DA0A0C4DH43 119 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 IFITM10A6NMD0 228 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 MARCH11A6NNE9 402 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 SRRM4A7MD48 611 aaKnown RBP6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 TOX4O94842 621 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 OR2C1O95371 312 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 IFNA21P01568 189 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 IAPPP10997 89 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 S100GP29377 79 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 DEFB113Q30KQ7 82 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 MIDNQ504T8 468 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 RPL7L1Q6DKI1 246 aaKnown RBP6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 BRD3OSQ6XYD6 125 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 HIST3H2BBQ8N257 126 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 ARL6IP6Q8N6S5 226 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 WFDC11Q8NEX6 87 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 OR9G1Q8NH87 305 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 C8orf46Q8TAG6 207 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 DDB2Q92466 427 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 ISOC2Q96AB3 205 aa6.23□□□□□ -1.41
AC005840.3-201ENST00000541888 Q96MF0 132 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms