RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 ZNF101Q8IZC7 436 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 ZNF709Q8N972 641 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 TMEM229BQ8NBD8 167 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 OR11G2Q8NGC1 345 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 IP6K3Q96PC2 410 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 LHX9Q9NQ69 397 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 ZNF586Q9NXT0 402 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 BRWD3Q6RI45 1802 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 TECPR2O15040 1411 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 ZNF518AQ6AHZ1 1483 aa3.6□□□□□ -1.83
PRKDC-209ENST00000540819 UBE2L6O14933 153 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 ZNF324O75467 553 aaPredicted RBP3.59□□□□□ -1.83
PRKDC-209ENST00000540819 NRASP01111 189 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HRASP01112 189 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 KRASP01116 189 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST1H2BOP23527 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 CASP1P29466 404 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 SRIP30626 198 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST1H2BBP33778 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 TGFBR1P36897 503 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST1H2BDP58876 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST1H2BCP62807 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST2H2BEQ16778 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.59□□□□□ -1.83
PRKDC-209ENST00000540819 RPL22L1Q6P5R6 122 aaKnown RBP3.59□□□□□ -1.83
PRKDC-209ENST00000540819 AMTNQ6UX39 209 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 ZFP62Q8NB50 900 aaPredicted RBP3.59□□□□□ -1.83
PRKDC-209ENST00000540819 OR4K15Q8NH41 348 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 H1FXQ92522 213 aaKnown RBP3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST1H2BHQ93079 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 RNASE6Q93091 150 aaKnown RBP3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST1H2BNQ99877 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 HIST1H2BMQ99879 126 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 POPDC3Q9HBV1 291 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 PCTPQ9UKL6 214 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 CELA1Q9UNI1 258 aa3.59□□□□□ -1.83
PRKDC-209ENST00000540819 KIF26BQ2KJY2 2108 aa3.59□□□□□ -1.84
PRKDC-209ENST00000540819 DSCAMO60469 2012 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 TRAV41A0A0B4J266 112 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 I3L521 148 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 SCTP09683 121 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 LINC00869P0C866 280 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 NTF3P20783 257 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 CD200P41217 278 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 LGALS9BQ3B8N2 356 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 MRPL51Q4U2R6 128 aaKnown RBP3.58□□□□□ -1.84
PRKDC-209ENST00000540819 FKBP1CQ5VVH2 108 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 LGALS9CQ6DKI2 356 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 IDO2Q6ZQW0 420 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 LCA10Q71F78 164 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 SSX8Q7RTT4 187 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 ZFAND2AQ8N6M9 145 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 ZNF433Q8N7K0 673 aaPredicted RBP3.58□□□□□ -1.84
PRKDC-209ENST00000540819 DAND5Q8N907 189 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 OR51T1Q8NGJ9 327 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 OR2H1Q9GZK4 316 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 GABARAPL1Q9H0R8 117 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 TUBA4BQ9H853 241 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 CALML5Q9NZT1 146 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 TNS2Q63HR2 1409 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 NUP210Q8TEM1 1887 aaPredicted RBP3.58□□□□□ -1.84
PRKDC-209ENST00000540819 ARHGAP21Q5T5U3 1957 aa3.58□□□□□ -1.84
PRKDC-209ENST00000540819 A0A087WUU8 490 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 IGKV1D-43A0A0B4J1Z2 117 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 LOC102725191A0A1B0GVB3 256 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 TRDV1A0A1B0GX56 115 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 CCDC160A6NGH7 325 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 OVOL1O14753 267 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 IGKV1-5P01602 117 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 PRM2P04554 102 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 IGHV3-30-3P0DP02 117 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 NPPCP23582 126 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 S100A11P31949 105 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 RPS10P46783 165 aaKnown RBP3.57□□□□□ -1.84
PRKDC-209ENST00000540819 EVX1P49640 407 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 RPL30P62888 115 aaKnown RBP3.57□□□□□ -1.84
PRKDC-209ENST00000540819 PSG7Q13046 419 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 OR8G1Q15617 311 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 RRN3P1Q2M238 152 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 OR8I2Q8N0Y5 310 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 TMEM203Q969S6 136 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 ZNF799Q96GE5 643 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 GPX7Q96SL4 187 aaPredicted RBP3.57□□□□□ -1.84
PRKDC-209ENST00000540819 TP73-AS1Q9UF72 201 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 TRAPPC2LQ9UL33 140 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 LINC00588Q9Y4M8 146 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 U3KQ87 197 aa3.57□□□□□ -1.84
PRKDC-209ENST00000540819 MYH11P35749 1972 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 DENND4CQ5VZ89 1909 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.56□□□□□ -1.84
PRKDC-209ENST00000540819 C9JAW5 83 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 ZNF73O43830 326 aaPredicted RBP3.56□□□□□ -1.84
PRKDC-209ENST00000540819 TNFSF15O95150 251 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 NDUFB2O95178 105 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 EVI2AP22794 236 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 CRYBB3P26998 211 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 CMPK1P30085 196 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 CSN1S1P47710 185 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms