RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 TMEM252Q8N6L7 170 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 ABHD5Q8WTS1 349 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 ARPC1AQ92747 370 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 SLC25A33Q9BSK2 321 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 RNF126Q9BV68 326 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 NPFFR1Q9GZQ6 430 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 MAGT1Q9H0U3 335 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 PRDM13Q9H4Q3 707 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 YAE1D1Q9NRH1 226 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 RNF24Q9Y225 148 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 SPG11Q96JI7 2443 aa9.45□□□□□ -0.9
VTN-202ENST00000539746 CENPEQ02224 2701 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 A0A0G2JRQ6 117 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 TEX46H3BTG2 121 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 CRYGBP07316 175 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 IGHV4-38-2P0DP08 117 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 RAB5CP51148 216 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 GNB1P62873 340 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 DIAPH2-AS1Q14236 149 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 HNF4GQ14541 408 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 FXYD3Q14802 87 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 OPCMLQ14982 345 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 BRD3OSQ6XYD6 125 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 Q6ZRM9 215 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 C1orf229Q6ZS94 237 aaPredicted RBP9.44□□□□□ -0.9
VTN-202ENST00000539746 UBAC2Q8NBM4 344 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 OR1P1Q8NH06 330 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 STOML3Q8TAV4 291 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 SRSF12Q8WXF0 261 aaKnown RBP9.44□□□□□ -0.9
VTN-202ENST00000539746 ATP5SQ99766 215 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 TMEM147Q9BVK8 224 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 ZNF471Q9BX82 626 aaPredicted RBP9.44□□□□□ -0.9
VTN-202ENST00000539746 OR5AC2Q9NZP5 309 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 VPREB3Q9UKI3 123 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 UNC79Q9P2D8 2635 aa9.44□□□□□ -0.9
VTN-202ENST00000539746 SRRM4A7MD48 611 aaKnown RBP9.43□□□□□ -0.9
VTN-202ENST00000539746 UMAD1C9J7I0 102 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 H3BUA1 57 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 H3BUX3 64 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 MBP02144 154 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 HKR1P10072 659 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 CD99P14209 185 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 RAB2AP61019 212 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 DLK1P80370 383 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 FAM120AOSQ5T036 256 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 UTF1Q5T230 341 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 LAMTOR1Q6IAA8 161 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 TMEM14EPQ6UXP3 125 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 ETV3LQ6ZN32 361 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 SLC35E1Q96K37 410 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 FBXL15Q9H469 300 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 TACC2O95359 2948 aa9.43□□□□□ -0.9
VTN-202ENST00000539746 CRYBG3Q68DQ2 2970 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 APCP25054 2843 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 CREBBPQ92793 2442 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 AKAP6Q13023 2319 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 NPIPB5A8MRT5 1133 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 SMLR1H3BR10 107 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 AP4M1O00189 453 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 CFDP00746 253 aaPredicted RBP9.42□□□□□ -0.9
VTN-202ENST00000539746 CA2P00918 260 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 IAPPP10997 89 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 SRD5A1P18405 259 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 VDAC2P45880 294 aaPredicted RBP9.42□□□□□ -0.9
VTN-202ENST00000539746 IER3P46695 156 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 SLC38A11Q08AI6 406 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 AKIRIN2Q53H80 203 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 ARSJQ5FYB0 599 aaPredicted RBP9.42□□□□□ -0.9
VTN-202ENST00000539746 KLF17Q5JT82 389 aaPredicted RBP9.42□□□□□ -0.9
VTN-202ENST00000539746 Q6YL49 198 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 BAP18Q8IXM2 172 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 PRSS22Q9GZN4 317 aa9.42□□□□□ -0.9
VTN-202ENST00000539746 UTP20O75691 2785 aaKnown RBP9.41□□□□□ -0.9
VTN-202ENST00000539746 RNF222A6NCQ9 220 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 A6NDX4 124 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 H0YIZ8 118 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 CLDN34H7C241 214 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
VTN-202ENST00000539746 OR13C7P0DN81 318 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 LINC00205P59089 165 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 SLC35B1P78383 322 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 SERF2P84101 59 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 LGALSLQ3ZCW2 172 aaPredicted RBP9.41□□□□□ -0.9
VTN-202ENST00000539746 RUSC1-AS1Q66K80 236 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 C5orf56Q8N8D9 126 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 MAPK1IP1LQ8NDC0 245 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 OR11H4Q8NGC9 324 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 OR5C1Q8NGR4 320 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 NPVFQ9HCQ7 196 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 PLSCR3Q9NRY6 295 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 UBQLN2Q9UHD9 624 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
VTN-202ENST00000539746 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms