RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 C1RLQ9NZP8 487 aa12.4□□□□□ -0.42
SFSWAP-206ENST00000537582 PITPNC1Q9UKF7 332 aa12.4□□□□□ -0.42
SFSWAP-206ENST00000537582 FBXO7Q9Y3I1 522 aa12.4□□□□□ -0.42
SFSWAP-206ENST00000537582 U3KQ87 197 aa12.4□□□□□ -0.42
SFSWAP-206ENST00000537582 PLXNB1O43157 2135 aa12.4□□□□□ -0.42
SFSWAP-206ENST00000537582 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 BTBD17A6NE02 478 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 COMPP49747 757 aaPredicted RBP12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 HSPE1P61604 102 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 WRBO00258 174 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 SPCS3P61009 180 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 RBMS3Q6XE24 437 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 C19orf35Q6ZS72 473 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 ZNF680Q8NEM1 530 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 C11orf1Q9H5F2 150 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
SFSWAP-206ENST00000537582 CEBPZOSA8MTT3 80 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 H3BP45 60 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 FGF16O43320 207 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 SYNGR2O43760 224 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 DEDDO75618 318 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 CNIH1O95406 144 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 RPL27AP46776 148 aaKnown RBP12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 PAX9P55771 341 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 FXYD3Q14802 87 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 OR1L8Q8NGR8 309 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 OR5B3Q8NH48 314 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 ZNF257Q9Y2Q1 563 aa12.38□□□□□ -0.43
SFSWAP-206ENST00000537582 MSGN1A6NI15 193 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 HMSDA8MTL9 139 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 TEX22C9J3V5 150 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 FAM90A26D6RGX4 464 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 GPR137BO60478 399 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 TSC22D2O75157 780 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 CRLF1O75462 422 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 ACTL6BO94805 426 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 IFNA7P01567 189 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 REG1AP05451 166 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 AREGP15514 252 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 VDAC2P45880 294 aaPredicted RBP12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 HOXA1P49639 335 aaPredicted RBP12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 SRSF2Q01130 221 aaKnown RBP12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 WT1-ASQ06250 92 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 PDLIM3Q53GG5 364 aaPredicted RBP12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 ZNF562Q6V9R5 426 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 DTD1Q8TEA8 209 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
SFSWAP-206ENST00000537582 FXYD6-FXYD2A0A087WZ82 144 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 LINC00862A6NCI5 91 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 FGF2P09038 288 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 MAS1LP35410 378 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 PRSS54Q6PEW0 395 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 ABHD5Q8WTS1 349 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 ARPC1AQ92747 370 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 PLEKHA3Q9HB20 300 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 PARP11Q9NR21 331 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 TEP1Q99973 2627 aaKnown RBP12.36□□□□□ -0.43
SFSWAP-206ENST00000537582 IGLC7A0M8Q6 106 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 ATP6V0E1O15342 81 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 ASPHD1Q5U4P2 390 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 C16orf82Q7Z2V1 217 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 TMEM86BQ8N661 226 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 DCUN1D4Q92564 292 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 LYL1P12980 280 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 SCGB2A2Q13296 93 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 OPCMLQ14982 345 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 CLLU1Q5K131 121 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 THAP6Q8TBB0 222 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 TMEM170AQ8WVE7 144 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 HEYLQ9NQ87 328 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-206ENST00000537582 FAM181BA6NEQ2 426 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 FAM24AA6NFZ4 105 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 L7N2F9 121 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 MED6O75586 246 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 SLC25A4P12235 298 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 CXCL2P19875 107 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 HILS1P60008 231 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 FGL1Q08830 312 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 TMEM267Q0VDI3 215 aaPredicted RBP12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 EXOSC2Q13868 293 aaKnown RBP12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 ZNF418Q8TF45 676 aaPredicted RBP12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 UBQLN2Q9UHD9 624 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 WSB1Q9Y6I7 421 aa12.34□□□□□ -0.43
SFSWAP-206ENST00000537582 RPS10-NUDT3A0A1W2PQS6 291 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 IGSF23A1L1A6 192 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms