RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SSC4DQ8WTU2 575 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 RDH5Q92781 318 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 EML5Q05BV3 1969 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 KIR2DS1A0A191URI9 304 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 KIR2DS4P43632 304 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 TCL1AP56279 114 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 KIR2DS1Q14954 304 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 CEACAM21Q3KPI0 293 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 SPSB4Q96A44 273 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 C10orf35Q96D05 121 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 ZC2HC1AQ96GY0 325 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 FAM173AQ9BQD7 235 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 SCO2A0A1W2PP80 73 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 SPRY1O43609 319 aaPredicted RBP9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 PPOXP50336 477 aa9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 YRDCQ86U90 279 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-207ENST00000537408 C9JCJ5 164 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 PTGDSP41222 190 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 ATP1A1-AS1Q5TC04 95 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 FNDC7Q5VTL7 733 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 DEFB127Q9H1M4 99 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 SELENOKQ9Y6D0 94 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 A0A1W2PPM0 123 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 RAB37Q96AX2 223 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 SPATA25Q9BR10 227 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 MED29Q9NX70 200 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 C1RLQ9NZP8 487 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 RALYQ9UKM9 306 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 PGLYRP1O75594 196 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 LEPROTL1O95214 131 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 CXorf1O96002 111 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 SLC35B1P78383 322 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 KIR3DS1Q14943 382 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 SHISA2Q6UWI4 295 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 NPCDR1Q9BY65 106 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 PNRC2Q9NPJ4 139 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 FAM90A26D6RGX4 464 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 SYS1-DBNDD2H3BUS1 97 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 OR7C1O76099 320 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 MEF2CQ06413 473 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 RNPS1Q15287 305 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 HSPB8Q9UJY1 196 aa9.11□□□□□ -0.95
CLSTN3-207ENST00000537408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 ADAMTSL5Q6ZMM2 481 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 ST8SIA1Q92185 356 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 A0A1W2PNR3 127 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 PSG2P11465 335 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 LHFPL2Q6ZUX7 228 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 CNEP1R1Q8N9A8 125 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 FDCSPQ8NFU4 85 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 GPHA2Q96T91 129 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 ALPK2Q86TB3 2170 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 TMEM249Q2WGJ8 235 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 TPRX1Q8N7U7 411 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 IGF2RP11717 2491 aa9.1□□□□□ -0.95
CLSTN3-207ENST00000537408 CENPFP49454 3210 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 FBLL1A6NHQ2 334 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 HERV-K104P63124 156 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 TIMM23BQ5SRD1 257 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 RAB1CQ92928 201 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 MS4A5Q9H3V2 200 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 OSTCQ9NRP0 149 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 V9GYV3 84 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 IGKV1D-43A0A0B4J1Z2 117 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 A0A1B0GW15 77 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 C2orf70A6NJV1 201 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 CCL21O00585 134 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 MEOX1P50221 254 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 AAED1Q7RTV5 226 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 ZNF418Q8TF45 676 aaPredicted RBP9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 JMJD8Q96S16 334 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 TRGV5A0A0B4J1U4 118 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 TMEM189A5PLL7 270 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 IZUMO1RA6ND01 250 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 RER1O15258 196 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 MRPL33O75394 65 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 CNIH1O95406 144 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 RPL31P62899 125 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 PDLIM3Q53GG5 364 aaPredicted RBP9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 RASL11AQ6T310 242 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 OR1A1Q9P1Q5 309 aa9.09□□□□□ -0.95
CLSTN3-207ENST00000537408 LY6G6EA0A0G2JKS1 128 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 NPIPB13A6NJU9 1138 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 NPIPB4C9JG80 1138 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 NEURL1O76050 574 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 LIPFP07098 398 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 COX8AP10176 69 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 IGFBP2P18065 325 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 PIGYQ3MUY2 71 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 OR4A16Q8NH70 328 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 PIGCQ92535 297 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TNFRSF19Q9NS68 423 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 LIN7CQ9NUP9 197 aaKnown RBP9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms