RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 YIF1AO95070 293 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 LALBAP00709 142 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 CTSGP08311 255 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 HLA-GP17693 338 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 CELP19835 753 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 CRHBPP24387 322 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 RPL30P62888 115 aaKnown RBP5.81□□□□□ -1.48
CLIP1-206ENST00000535290 RPL8P62917 257 aaKnown RBP5.81□□□□□ -1.48
CLIP1-206ENST00000535290 FLOT2Q14254 428 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 ATP6AP1Q15904 470 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 UBE2UQ5VVX9 321 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 Q6ZSN1 163 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 AMIGO2Q86SJ2 522 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 UBAC2Q8NBM4 344 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 OR4A4PQ8NGN8 299 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 ST8SIA2Q92186 375 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 OR10C1Q96KK4 312 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 SLC29A1Q99808 456 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 C21orf62Q9NYP8 219 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 THYN1Q9P016 225 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 DKK2Q9UBU2 259 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 RBM7Q9Y580 266 aaKnown RBP5.81□□□□□ -1.48
CLIP1-206ENST00000535290 U3KQE9 123 aa5.81□□□□□ -1.48
CLIP1-206ENST00000535290 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 TRAV14DV4A0A0A6YYC5 116 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 IGHV3-66A0A0C4DH42 116 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 SNTNA6NMZ2 147 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 APOHP02749 345 aaPredicted RBP5.8□□□□□ -1.48
CLIP1-206ENST00000535290 GABRB1P18505 474 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 BRWD1-AS2P59051 145 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 OR2B8PP59922 312 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 HAMPP81172 84 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 QRFPP83859 136 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 ACTL10Q5JWF8 245 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 FAM222AQ5U5X8 452 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 ZFP41Q8N8Y5 198 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 OR10W1Q8NGF6 305 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 OR10J5Q8NHC4 309 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 VSTM2AQ8TAG5 236 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 SCARB1Q8WTV0 552 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 DGCR14Q96DF8 476 aaKnown RBP5.8□□□□□ -1.48
CLIP1-206ENST00000535290 PGLYRP3Q96LB9 341 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 CMSS1Q9BQ75 279 aaKnown RBP5.8□□□□□ -1.48
CLIP1-206ENST00000535290 NIPSNAP3BQ9BS92 247 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 CABLES2Q9BTV7 478 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 XCL2Q9UBD3 114 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 LINC00588Q9Y4M8 146 aa5.8□□□□□ -1.48
CLIP1-206ENST00000535290 TRAV2A0A0B4J234 112 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 FOXI3A8MTJ6 420 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-206ENST00000535290 TMEM14DPA8MWL7 114 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 J3QRK9 145 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 ST8SIA3O43173 380 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 UBBP0CG47 229 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 ETV1P50549 477 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 TMEM50BP56557 158 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 Q56UQ5 140 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 HSP90B2PQ58FF3 399 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 YIF1BQ5BJH7 314 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 SLC25A24Q6NUK1 477 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 KCTD9Q7L273 389 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 NKAIN3Q8N8D7 197 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 C15orf53Q8NAA6 179 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 DUSP18Q8NEJ0 188 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 ARHGAP5-AS1Q96IT6 56 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 DERL3Q96Q80 235 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 ARPC5LQ9BPX5 153 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 LPAR5Q9H1C0 372 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 VSIRQ9H7M9 311 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 BABAM2Q9NXR7 383 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 PTTG2Q9NZH5 202 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 RABAC1Q9UI14 185 aa5.79□□□□□ -1.48
CLIP1-206ENST00000535290 TRAV3A0A0B4J244 114 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 K7EIM0 57 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 K7EQG2 157 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 IGLV2-14P01704 120 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 CD5P06127 495 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 H2AFB1P0C5Y9 115 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 H2AFB2P0C5Z0 115 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 ZNF688P0C7X2 276 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 ICAM4Q14773 271 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 OXA1LQ15070 435 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 ZNF705AQ6ZN79 300 aaPredicted RBP5.78□□□□□ -1.48
CLIP1-206ENST00000535290 H1FOOQ8IZA3 346 aaPredicted RBP5.78□□□□□ -1.48
CLIP1-206ENST00000535290 FAM89BQ8N5H3 189 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 GDPD1Q8N9F7 314 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 MAFIPQ8WZ33 124 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 ATP6V0BQ99437 205 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 NEU1Q99519 415 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 Q9H8V8 135 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 MRPS18AQ9NVS2 196 aaKnown RBP5.78□□□□□ -1.48
CLIP1-206ENST00000535290 HSF4Q9ULV5 492 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 MRPS7Q9Y2R9 242 aaKnown RBP5.78□□□□□ -1.48
CLIP1-206ENST00000535290 ARL2BPQ9Y2Y0 163 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 PRELID3BQ9Y3B1 194 aa5.78□□□□□ -1.48
CLIP1-206ENST00000535290 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 TMEM189A5PLL7 270 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 ZNF705FA8MVS1 300 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-206ENST00000535290 ZNF705DP0CH99 300 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-206ENST00000535290 ZNF705BP0CI00 300 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms