RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SERPINB10P48595 397 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 DAPP51397 102 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 ESRGQ1W209 222 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 PSMG4Q5JS54 123 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 PUSL1Q8N0Z8 303 aaKnown RBP7.21□□□□□ -1.26
CSDE1-215ENST00000533818 GINS3Q9BRX5 216 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 RAB21Q9UL25 225 aa7.21□□□□□ -1.26
CSDE1-215ENST00000533818 EXOGQ9Y2C4 368 aaKnown RBP7.21□□□□□ -1.26
CSDE1-215ENST00000533818 MRPS16Q9Y3D3 137 aaKnown RBP7.21□□□□□ -1.26
CSDE1-215ENST00000533818 H3BMM0 161 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 BET1O15155 118 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 CD3GP09693 182 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 IGFBP3P17936 291 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-215ENST00000533818 FXYD7P58549 80 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 OR2B11Q5JQS5 317 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 OGFRL1Q5TC84 451 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-215ENST00000533818 LHFPL3Q86UP9 236 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 NFE4Q86UQ8 179 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 DHFR2Q86XF0 187 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 GGHQ92820 318 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 TMEM231Q9H6L2 316 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 PLEKHJ1Q9NW61 149 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 CKLFQ9UBR5 152 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 PRELID3BQ9Y3B1 194 aa7.2□□□□□ -1.26
CSDE1-215ENST00000533818 TRDCB7Z8K6 153 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 ATP5G1P05496 136 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 HTR2CP28335 458 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 ATP5G3P48201 142 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 GBX2P52951 348 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-215ENST00000533818 MRPL28Q13084 256 aaKnown RBP7.19□□□□□ -1.26
CSDE1-215ENST00000533818 RRN3P1Q2M238 152 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 LELP1Q5T871 98 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 SYS1Q8N2H4 156 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 GDPD1Q8N9F7 314 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 OR8J1Q8NGP2 316 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 DCANP1Q8TF63 244 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 MYCBPQ99417 103 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-215ENST00000533818 AK3Q9UIJ7 227 aa7.19□□□□□ -1.26
CSDE1-215ENST00000533818 MRPS7Q9Y2R9 242 aaKnown RBP7.19□□□□□ -1.26
CSDE1-215ENST00000533818 TRAV8-7A0A075B6U6 113 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 HELTA6NFD8 242 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 K7EIM0 57 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 RS1O15537 224 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 C1QBP02746 253 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 SRMP19623 302 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 PRDX6P30041 224 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 GTF2A1P52655 376 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-215ENST00000533818 TOMM20LQ6UXN7 152 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 ARHGAP24Q8N264 748 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 OR10W1Q8NGF6 305 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 OR10J5Q8NHC4 309 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 UQCC2Q9BRT2 126 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 NXF2Q9GZY0 626 aaKnown RBP7.18□□□□□ -1.26
CSDE1-215ENST00000533818 GOLT1BQ9Y3E0 138 aa7.18□□□□□ -1.26
CSDE1-215ENST00000533818 LYRM9A8MSI8 78 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 IGKV3-20P01619 116 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 SERPINE2P07093 398 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 OR13C7P0DN81 318 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 CELP19835 753 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 RCN1Q15293 331 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 IGSF11Q5DX21 431 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 OR10K2Q6IF99 312 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 KCTD9Q7L273 389 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 CDH26Q8IXH8 852 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 DEFB107AQ8IZN7 70 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 OR4A4PQ8NGN8 299 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 NTN5Q8WTR8 489 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-215ENST00000533818 FCGR1BQ92637 280 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 GNPNAT1Q96EK6 184 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-215ENST00000533818 Q96MT0 163 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 C7orf50Q9BRJ6 194 aaKnown RBP7.17□□□□□ -1.26
CSDE1-215ENST00000533818 C12orf4Q9NQ89 552 aa7.17□□□□□ -1.26
CSDE1-215ENST00000533818 HOXA1P49639 335 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-215ENST00000533818 MS4A2Q01362 244 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 DHRS2Q13268 280 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 YIF1BQ5BJH7 314 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 ZNF773Q6PK81 442 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 ADGRG5Q8IZF4 528 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 C1orf158Q8N1D5 194 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 OR4S2Q8NH73 311 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 COMMD5Q9GZQ3 224 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 HRASLSQ9HDD0 168 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 TNXBP22105 4242 aa7.16□□□□□ -1.26
CSDE1-215ENST00000533818 MUC2Q02817 5179 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 A0A1W2PS18 150 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 CBY3A6NI87 242 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 SIVA1O15304 175 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 FABP7O15540 132 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 HRASP01112 189 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 NPPCP23582 126 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 MFAP4P55083 255 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 TAS2R43P59537 309 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 RPL30P62888 115 aaKnown RBP7.15□□□□□ -1.26
CSDE1-215ENST00000533818 RBM48Q5RL73 367 aaKnown RBP7.15□□□□□ -1.26
CSDE1-215ENST00000533818 CANT1Q8WVQ1 401 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 NRBF2Q96F24 287 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 QTRT1Q9BXR0 403 aaKnown RBP7.15□□□□□ -1.26
CSDE1-215ENST00000533818 TMEM59Q9BXS4 323 aa7.15□□□□□ -1.26
CSDE1-215ENST00000533818 F11RQ9Y624 299 aaKnown RBP7.15□□□□□ -1.26
CSDE1-215ENST00000533818 TRBV6-7A0A0A0MS04 114 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms