RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ZNF562Q6V9R5 426 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 GOLT1AQ6ZVE7 132 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 LINC00305Q7Z4B0 112 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 MUC15Q8N387 334 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 LRTM2Q8N967 370 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 FMC1Q96HJ9 113 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 RAXQ9Y2V3 346 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 NRXN2Q9P2S2 1712 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 CCDC88CQ9P219 2028 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 GPX1P07203 203 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 LINC00271P0C7V0 271 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 APOBEC3AP31941 199 aaPredicted RBP5.93□□□□□ -1.46
CTNND1-236ENST00000533667 PDLIM4P50479 330 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 DLX6P56179 175 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 GAGE2BQ13066 116 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 GAGE2EQ4V326 116 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 C1orf194Q5T5A4 169 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 BOD1L2Q8IYS8 172 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 OR4D5Q8NGN0 318 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 GAGE2DQ9UEU5 116 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 CKAP5Q14008 2032 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 IGLV3-12A0A075B6K2 115 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 IGLV3-32A0A0A0MS00 114 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 MSGN1A6NI15 193 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 H7C1H1 209 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 RAMP3O60896 148 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 ATP5LO75964 103 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 SNRPCP09234 159 aaKnown RBP5.93□□□□□ -1.46
CTNND1-236ENST00000533667 NBEAP1P0C6P0 100 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 SP9P0CG40 484 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 COX6B1P14854 86 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 SNRPD3P62318 126 aaKnown RBP5.93□□□□□ -1.46
CTNND1-236ENST00000533667 TBR1Q16650 682 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 C1QL2Q7Z5L3 287 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 SDF2L1Q9HCN8 221 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 AUP1Q9Y679 476 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 GREB1LQ9C091 1923 aaPredicted RBP5.93□□□□□ -1.46
CTNND1-236ENST00000533667 A1L4Q6 167 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 IQCF6A8MYZ5 107 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 IL4P05112 153 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 NEUROG1Q92886 237 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 GPHA2Q96T91 129 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 MOB4Q9Y3A3 225 aa5.93□□□□□ -1.46
CTNND1-236ENST00000533667 KBTBD11-OT1A0A1B0GTJ5 212 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 A0A1B0GWB2 263 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 OR11H12B2RN74 326 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 PEX7O00628 323 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 TSPAN13O95857 204 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 CIARTQ8N365 385 aaPredicted RBP5.92□□□□□ -1.46
CTNND1-236ENST00000533667 OR11H1Q8NG94 326 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 OR11H2Q8NH07 326 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 ZNF414Q96IQ9 312 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 ATG2BQ96BY7 2078 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 SCN10AQ9Y5Y9 1956 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 TRBV6-7A0A0A0MS04 114 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 LOC101059948A0A1B0GTJ6 334 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 RRHO14718 337 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 ZIC3O60481 467 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 TCF23Q7RTU1 214 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 ZNF525Q8N782 197 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 C18orf12Q96KH6 178 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 NEU1Q99519 415 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 SSBP4Q9BWG4 385 aaPredicted RBP5.92□□□□□ -1.46
CTNND1-236ENST00000533667 POLR2AP24928 1970 aaKnown RBP5.92□□□□□ -1.46
CTNND1-236ENST00000533667 ARID2Q68CP9 1835 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 ANKRD36A6QL64 1941 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 TRAV14DV4A0A0A6YYC5 116 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 FAM90A9PA6NNJ1 464 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 F8VVB4 439 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 F8VWA3 439 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 TNFSF13O75888 250 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 HIST1H1AQ02539 215 aaPredicted RBP5.92□□□□□ -1.46
CTNND1-236ENST00000533667 NEU4Q8WWR8 484 aaPredicted RBP5.92□□□□□ -1.46
CTNND1-236ENST00000533667 TMEM106BQ9NUM4 274 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 DPM3Q9P2X0 92 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 UNC13CQ8NB66 2214 aa5.92□□□□□ -1.46
CTNND1-236ENST00000533667 TRBV20OR9-2A0A075B6H5 130 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 A0A1B0GUT8 65 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 CBLN1P23435 193 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 SRSF7Q16629 238 aaKnown RBP eCLIP5.91□□□□□ -1.461e-6■■□□□ 13.9
CTNND1-236ENST00000533667 PRSS8Q16651 343 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 KIAA1644Q3SXP7 199 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 MBNL2Q5VZF2 373 aaKnown RBP5.91□□□□□ -1.46
CTNND1-236ENST00000533667 FAM159AQ6UWV7 190 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 FAM89BQ8N5H3 189 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 IMMP1LQ96LU5 166 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 KLF2Q9Y5W3 355 aaPredicted RBP5.91□□□□□ -1.46
CTNND1-236ENST00000533667 LINC00312Q9Y6C7 94 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 TIAF1O95411 115 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 CECR9P0C854 216 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 OTX1P32242 354 aaPredicted RBP5.91□□□□□ -1.46
CTNND1-236ENST00000533667 RPL39P5Q59GN2 51 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 TMEM144Q7Z5S9 345 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 VKORC1L1Q8N0U8 176 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 RPP21Q9H633 154 aaKnown RBP5.91□□□□□ -1.46
CTNND1-236ENST00000533667 IGKV1D-43A0A0B4J1Z2 117 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 IZUMO1RA6ND01 250 aa5.91□□□□□ -1.46
CTNND1-236ENST00000533667 A6NNC1 897 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms