RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CCDC59Q9P031 241 aaKnown RBP23.03■■□□□ 1.28
SSSCA1-207ENST00000533115 OR51B2Q9Y5P1 312 aa23.03■■□□□ 1.28
SSSCA1-207ENST00000533115 GABARAPH6UMI1 98 aa23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 OR2C1O95371 312 aa23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 OR13C7P0DN81 318 aa23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 PGAM2P15259 253 aa23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 PTBP1P26599 531 aaKnown RBP eCLIP23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 WT1-ASQ06250 92 aa23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 ZNF486Q96H40 463 aaPredicted RBP23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 THYN1Q9P016 225 aa23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 PRNDQ9UKY0 176 aa23.02■■□□□ 1.28
SSSCA1-207ENST00000533115 TRBV7-1A0A0A6YYK4 115 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 MFSD2BA6NFX1 497 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 CD74P04233 296 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 SERPINE2P07093 398 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 TAS2R19P59542 299 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 RND3P61587 244 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 MRPS10P82664 201 aaKnown RBP23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 Q8N1Y9 231 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 GDPD1Q8N9F7 314 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 TSC22D3Q99576 134 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 HINT2Q9BX68 163 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 FKBP11Q9NYL4 201 aa23.01■■□□□ 1.27
SSSCA1-207ENST00000533115 CYB5BO43169 146 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 IGKV1-39P01597 117 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 IGKV1D-39P04432 117 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 MECP2P51608 486 aaKnown RBP23■■□□□ 1.27
SSSCA1-207ENST00000533115 SSBP1Q04837 148 aaKnown RBP23■■□□□ 1.27
SSSCA1-207ENST00000533115 LCN12Q6JVE5 192 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 GPHB5Q86YW7 130 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 Q8N402 240 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 OR4D10Q8NGI6 311 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 LSM10Q969L4 123 aaKnown RBP23■■□□□ 1.27
SSSCA1-207ENST00000533115 SEC22AQ96IW7 307 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 U3KQK5 164 aa23■■□□□ 1.27
SSSCA1-207ENST00000533115 LGALS9O00182 355 aa22.99■■□□□ 1.27
SSSCA1-207ENST00000533115 NOL3O60936 208 aaKnown RBP22.99■■□□□ 1.27
SSSCA1-207ENST00000533115 FRMD6-AS1P0C7T7 363 aa22.99■■□□□ 1.27
SSSCA1-207ENST00000533115 PI3P19957 117 aa22.99■■□□□ 1.27
SSSCA1-207ENST00000533115 ADAMTSL5Q6ZMM2 481 aa22.99■■□□□ 1.27
SSSCA1-207ENST00000533115 OR5B3Q8NH48 314 aa22.99■■□□□ 1.27
SSSCA1-207ENST00000533115 TMEM14BQ9NUH8 114 aa22.99■■□□□ 1.27
SSSCA1-207ENST00000533115 C15orf61A6NNL5 157 aa22.98■■□□□ 1.27
SSSCA1-207ENST00000533115 RAB3DO95716 219 aa22.98■■□□□ 1.27
SSSCA1-207ENST00000533115 STEAP1BQ6NZ63 245 aa22.98■■□□□ 1.27
SSSCA1-207ENST00000533115 OR2K2Q8NGT1 345 aa22.98■■□□□ 1.27
SSSCA1-207ENST00000533115 TERB2Q8NHR7 220 aa22.98■■□□□ 1.27
SSSCA1-207ENST00000533115 DIRAS2Q96HU8 199 aa22.98■■□□□ 1.27
SSSCA1-207ENST00000533115 DBX1A6NMT0 343 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 CLEC3BP05452 202 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 PPP5CP53041 499 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 PIGPP57054 158 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 H2BFWTQ7Z2G1 175 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 SBSPONQ8IVN8 264 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 ZNF502Q8TBZ5 544 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 SMIM4Q8WVI0 70 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 MRGPRFQ96AM1 343 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 TMEM56Q96MV1 263 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 WWC2-AS2Q96NR7 200 aa22.97■■□□□ 1.27
SSSCA1-207ENST00000533115 IZUMO1RA6ND01 250 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 C2orf70A6NJV1 201 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 H3BMQ9 156 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 IL18Q14116 193 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 SCGB2B2Q4G0G5 96 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 FAM106AQ4KMX7 169 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 SLC25A24Q6NUK1 477 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 RABL2AQ9UBK7 228 aaPredicted RBP22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 RABL2BQ9UNT1 228 aa22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 F11RQ9Y624 299 aaKnown RBP22.96■■□□□ 1.27
SSSCA1-207ENST00000533115 CTDSPLO15194 276 aa22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 IGHV4-30-4P0DP06 118 aa22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 SGPP2Q8IWX5 399 aa22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 OR4A16Q8NH70 328 aa22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 ZFAND1Q8TCF1 268 aa22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 VN1R17PQ8TDU5 208 aa22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 ISOC1Q96CN7 298 aa22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 THAP7Q9BT49 309 aaPredicted RBP22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 C6orf62Q9GZU0 229 aaPredicted RBP22.95■■□□□ 1.26
SSSCA1-207ENST00000533115 FOLR2P14207 255 aa22.94■■□□□ 1.26
SSSCA1-207ENST00000533115 GPR183P32249 361 aa22.94■■□□□ 1.26
SSSCA1-207ENST00000533115 DYNLRB2Q8TF09 96 aa22.94■■□□□ 1.26
SSSCA1-207ENST00000533115 SLIRPQ9GZT3 109 aaKnown RBP22.94■■□□□ 1.26
SSSCA1-207ENST00000533115 ZC4H2Q9NQZ6 224 aa22.94■■□□□ 1.26
SSSCA1-207ENST00000533115 EDN2P20800 178 aa22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 MFAP2P55001 183 aa22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 MEF2DQ14814 521 aa22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 CD300EQ496F6 205 aaPredicted RBP22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 GTSCR1Q86UQ5 136 aa22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 OR13C8Q8NGS7 320 aa22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 TP53RKQ96S44 253 aa22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 COPZ2Q9P299 210 aa22.93■■□□□ 1.26
SSSCA1-207ENST00000533115 HUWE1Q7Z6Z7 4374 aaKnown RBP22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 ZNF320A2RRD8 509 aa22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 A8MZ25 164 aa22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 DEFB114Q30KQ6 69 aa22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 CCDC71LQ8N9Z2 235 aa22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 OR1L6Q8NGR2 347 aa22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 MARCH1Q8TCQ1 289 aa22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 TENM3Q9P273 2699 aa22.92■■□□□ 1.26
SSSCA1-207ENST00000533115 C3orf85A0A1B0GTC6 90 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms