RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 TOLLIPQ9H0E2 274 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 DHRS11Q6UWP2 260 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 SRSF12Q8WXF0 261 aaKnown RBP13□□□□□ -0.33
PPFIA1-222ENST00000532504 SFTA3P0C7M3 94 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 HIST1H1BP16401 226 aaKnown RBP13□□□□□ -0.33
PPFIA1-222ENST00000532504 HLA-DRB5Q30154 266 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 TCRBV4S1A1TA0A5B7 111 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 HSBP1L1C9JCN9 74 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 TMEM155Q4W5P6 130 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 C21orf62Q9NYP8 219 aa13□□□□□ -0.33
PPFIA1-222ENST00000532504 IGLV1-44P01699 117 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 ZNF439Q8NDP4 499 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 C8orf46Q8TAG6 207 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 ITLN2Q8WWU7 325 aaPredicted RBP12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 TNFSF18Q9UNG2 199 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 SPTBN4Q9H254 2564 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 TP53BP1Q12888 1972 aaPredicted RBP12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 CXorf1O96002 111 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 BPIFA4PQ86YQ2 179 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 RTBDNQ9BSG5 229 aaPredicted RBP12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 UFC1Q9Y3C8 167 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 GATCO43716 136 aaKnown RBP12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 FABP9Q0Z7S8 132 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 STPG3Q8N7X2 389 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 COQ2Q96H96 371 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 LYRM2Q9NU23 88 aaPredicted RBP12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 TMEM56-RWDD3S4R434 201 aa12.99□□□□□ -0.33
PPFIA1-222ENST00000532504 MMP9P14780 707 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 UCP1P25874 307 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 TDGF1P3P51864 188 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 DLX1P56177 255 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 ELOVL1Q9BW60 279 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 CTXND1A0A1B0GTU2 59 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 TMEM241Q24JQ0 296 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 PRNTQ86SH4 94 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 CR1LQ2VPA4 569 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 IL17RELQ6ZVW7 336 aa12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 TAF15Q92804 592 aaKnown RBP eCLIP12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 AURKAIP1Q9NWT8 199 aaPredicted RBP12.98□□□□□ -0.33
PPFIA1-222ENST00000532504 SAA4P35542 130 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 LGALSLQ3ZCW2 172 aaPredicted RBP12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 MMP26Q9NRE1 261 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 CCDC168Q8NDH2 2452 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 HSPB1P04792 205 aaKnown RBP12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 DUTP33316 252 aaKnown RBP12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 H2BFSP57053 126 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 Q6P435 159 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 DUX4L9Q6RFH8 374 aaPredicted RBP12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 RBFOX3A6NFN3 312 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 SLC31A2O15432 143 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 ZNF324BQ6AW86 544 aaPredicted RBP12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 DNAJC4Q9NNZ3 241 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 M0R1W7 72 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 AP4M1O00189 453 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 C3orf36Q3SXR2 165 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 SIGIRRQ6IA17 410 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 COMMD1Q8N668 190 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 TNFRSF14Q92956 283 aa12.97□□□□□ -0.33
PPFIA1-222ENST00000532504 IGHV1-3A0A0C4DH29 117 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 SHISA9B4DS77 424 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 MPDU1O75352 247 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 SRSF10O75494 262 aaKnown RBP12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 CGAP01215 116 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 MANBALQ9NQG1 85 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 BEX4Q9NWD9 120 aaPredicted RBP12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 MOB4Q9Y3A3 225 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 UPK2O00526 184 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 TCL1AP56279 114 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 C10orf55Q5SWW7 151 aa12.96□□□□□ -0.33
PPFIA1-222ENST00000532504 MALRD1Q5VYJ5 2156 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 ZNF735P0CB33 412 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 RND3P61587 244 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 EFNB3Q15768 340 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 NHLRC3Q5JS37 347 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 SEM1Q6ZVN7 128 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 PHYHIPLQ96FC7 376 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 SMIM8Q96KF7 97 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 SDHCQ99643 169 aaPredicted RBP12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 REG4Q9BYZ8 158 aa12.96□□□□□ -0.34
PPFIA1-222ENST00000532504 RRHO14718 337 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 MPZP25189 248 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 RPL35P42766 123 aaKnown RBP12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 RHOGP84095 191 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 G3V3Q6 166 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 DLX6P56179 175 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 LDLRAD3Q86YD5 345 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 IFI27L2Q9H2X8 130 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 CAMPP49913 170 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms