RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 RPL8P62917 257 aaKnown RBP9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 CX3CL1P78423 397 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 NDPQ00604 133 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 C9orf152Q5JTZ5 239 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 C10orf55Q5SWW7 151 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 OR4A16Q8NH70 328 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 RNF126Q9BV68 326 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 QTRT1Q9BXR0 403 aaKnown RBP9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 TMEM14BQ9NUH8 114 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 A0A1B0GU03 582 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 C13orf42A0A1B0GVH6 325 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 C15orf61A6NNL5 157 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 FAM25EA8MYX2 175 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 E7EUB6 86 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 TRIM77I1YAP6 450 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 CFDP00746 253 aaPredicted RBP9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 OPN1MWP04001 364 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 OPN1MW2P0DN77 364 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 OPN1MW3P0DN78 364 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 SMCO1Q147U7 214 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 TNXAQ16473 311 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 KRTAP24-1Q3LI83 254 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 ZNF562Q6V9R5 426 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 FOXRED2Q8IWF2 684 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 NPFFR1Q9GZQ6 430 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 PRNDQ9UKY0 176 aa9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 FOXA2Q9Y261 457 aaPredicted RBP9.61□□□□□ -0.87
TRAF3IP2-211ENST00000528599 TEX50A0A1B0GTY4 177 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 A0A1B0GW64 132 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 CGB1A6NKQ9 187 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 ST8SIA3O43173 380 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 PITX3O75364 302 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 RBMXL2O75526 392 aaKnown RBP9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 IGHG2P01859 326 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 FGF2P09038 288 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 SLC25A6P12236 298 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 MAS1LP35410 378 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 COMPP49747 757 aaPredicted RBP9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 RAB14P61106 215 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 FXYD3Q14802 87 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 IAH1Q2TAA2 248 aaPredicted RBP9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 PRSS54Q6PEW0 395 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 COA4Q9NYJ1 87 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 FBXO7Q9Y3I1 522 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 OR51B2Q9Y5P1 312 aa9.6□□□□□ -0.87
TRAF3IP2-211ENST00000528599 RPS10-NUDT3A0A1W2PQS6 291 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 RNF222A6NCQ9 220 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 ACTL6BO94805 426 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 NXPH3O95157 252 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 CNIH1O95406 144 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 PET100P0DJ07 73 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 RPL15P61313 204 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 CXorf66Q5JRM2 361 aaPredicted RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 THOC7Q6I9Y2 204 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 Q6ZSV7 163 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 ZNF429Q86V71 674 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 INO80EQ8NBZ0 244 aaPredicted RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 SCARB1Q8WTV0 552 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 SRSF12Q8WXF0 261 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 SPIN2AQ99865 258 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 SPIN2BQ9BPZ2 258 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 FAM103A1Q9BTL3 118 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 PRSS22Q9GZN4 317 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 COMMD5Q9GZQ3 224 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 STAB1Q9NY15 2570 aa9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 TET2Q6N021 2002 aaPredicted RBP9.59□□□□□ -0.87
TRAF3IP2-211ENST00000528599 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 RPL27AP46776 148 aaKnown RBP9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 HSPE1P61604 102 aaKnown RBP9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 TMEM95Q3KNT9 176 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 SLC35E3Q7Z769 313 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 Q8N2B8 174 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 OR4D5Q8NGN0 318 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 OR1S1Q8NH92 325 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 ARPC1AQ92747 370 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 PHYHIPLQ96FC7 376 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 PARP11Q9NR21 331 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 ZFP57Q9NU63 452 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 FKBP11Q9NYL4 201 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 MBD2Q9UBB5 411 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 ZNF257Q9Y2Q1 563 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 KANTRA0A1W2PQU2 76 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 ANKRD34BA5PLL1 514 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 MSGN1A6NI15 193 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 TEX22C9J3V5 150 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 H0YIZ8 118 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 BCL2L11O43521 198 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 TSPAN9O75954 239 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 CRYBA1P05813 215 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 AP2S1P53680 142 aaPredicted RBP9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 LRRC37A5PQ49AS3 106 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 SPINK9Q5DT21 86 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 OR10W1Q8NGF6 305 aa9.58□□□□□ -0.88
TRAF3IP2-211ENST00000528599 OR1L8Q8NGR8 309 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms