RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 EDA2RQ9HAV5 297 aa15.6■□□□□ 0.09
SDCBP-209ENST00000522243 RETNQ9HD89 108 aa15.6■□□□□ 0.09
SDCBP-209ENST00000522243 PALMDQ9NP74 551 aa15.6■□□□□ 0.09
SDCBP-209ENST00000522243 TECRQ9NZ01 308 aaKnown RBP15.6■□□□□ 0.09
SDCBP-209ENST00000522243 NBEAL2Q6ZNJ1 2754 aa15.6■□□□□ 0.09
SDCBP-209ENST00000522243 SMIM31A0A1B0GVY4 71 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 HPGDSO60760 199 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 OR13C7P0DN81 318 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 TSPAN5P62079 268 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 TM4SF20Q53R12 229 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 UNQ9165/PRO28630Q6UXU0 137 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 LAX1Q8IWV1 398 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 CMTM1Q8IZ96 169 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 UXS1Q8NBZ7 420 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 OR1L8Q8NGR8 309 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 ZNF502Q8TBZ5 544 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 SRSF8Q9BRL6 282 aaKnown RBP15.59■□□□□ 0.09
SDCBP-209ENST00000522243 MLXQ9UH92 298 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 CEPT1Q9Y6K0 416 aa15.59■□□□□ 0.09
SDCBP-209ENST00000522243 APOA1P02647 267 aa15.58■□□□□ 0.08
SDCBP-209ENST00000522243 ELK1P19419 428 aa15.58■□□□□ 0.08
SDCBP-209ENST00000522243 WT1-ASQ06250 92 aa15.58■□□□□ 0.08
SDCBP-209ENST00000522243 SLC25A24Q6NUK1 477 aa15.58■□□□□ 0.08
SDCBP-209ENST00000522243 ISOC1Q96CN7 298 aa15.58■□□□□ 0.08
SDCBP-209ENST00000522243 THYN1Q9P016 225 aa15.58■□□□□ 0.08
SDCBP-209ENST00000522243 IGHV3-21A0A0B4J1V1 117 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 OR11H12B2RN74 326 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 SNAPC5O75971 98 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 SERPINE2P07093 398 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 RNASE12Q5GAN4 147 aaKnown RBP15.57■□□□□ 0.08
SDCBP-209ENST00000522243 ZNF57Q68EA5 555 aaPredicted RBP15.57■□□□□ 0.08
SDCBP-209ENST00000522243 THOC7Q6I9Y2 204 aaKnown RBP15.57■□□□□ 0.08
SDCBP-209ENST00000522243 PLET1Q6UQ28 207 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 LINC00322Q6ZN03 302 aaPredicted RBP15.57■□□□□ 0.08
SDCBP-209ENST00000522243 TMEM61Q8N0U2 210 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 GDPD1Q8N9F7 314 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 CMTM3Q96MX0 182 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 NAA50Q9GZZ1 169 aaKnown RBP15.57■□□□□ 0.08
SDCBP-209ENST00000522243 SRD5A3Q9H8P0 318 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 GAR1Q9NY12 217 aaKnown RBP15.57■□□□□ 0.08
SDCBP-209ENST00000522243 OR51B2Q9Y5P1 312 aa15.57■□□□□ 0.08
SDCBP-209ENST00000522243 STAB2Q8WWQ8 2551 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 RBMY1BA6NDE4 496 aaKnown RBP15.56■□□□□ 0.08
SDCBP-209ENST00000522243 RBMY1EA6NEQ0 496 aaKnown RBP15.56■□□□□ 0.08
SDCBP-209ENST00000522243 A8MWP6 167 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 SCAF4O95104 1147 aaKnown RBP15.56■□□□□ 0.08
SDCBP-209ENST00000522243 IFNA6P05013 189 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 FGF2P09038 288 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 RBMY1DP0C7P1 496 aaKnown RBP15.56■□□□□ 0.08
SDCBP-209ENST00000522243 PTBP1P26599 531 aaKnown RBP eCLIP15.56■□□□□ 0.08
SDCBP-209ENST00000522243 MFAP2P55001 183 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 BTNL8Q6UX41 500 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 FAM110AQ9BQ89 295 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 SCPEP1Q9HB40 452 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 NDUFA4L2Q9NRX3 87 aa15.56■□□□□ 0.08
SDCBP-209ENST00000522243 FAM25AB3EWG3 89 aa15.55■□□□□ 0.08
SDCBP-209ENST00000522243 FAM25CB3EWG5 89 aa15.55■□□□□ 0.08
SDCBP-209ENST00000522243 FAM25GB3EWG6 89 aa15.55■□□□□ 0.08
SDCBP-209ENST00000522243 RCVRNP35243 200 aa15.55■□□□□ 0.08
SDCBP-209ENST00000522243 RORCP51449 518 aa15.55■□□□□ 0.08
SDCBP-209ENST00000522243 TBC1D26Q86UD7 250 aa15.55■□□□□ 0.08
SDCBP-209ENST00000522243 LSM10Q969L4 123 aaKnown RBP15.55■□□□□ 0.08
SDCBP-209ENST00000522243 HIPK2Q9H2X6 1198 aa15.55■□□□□ 0.08
SDCBP-209ENST00000522243 OR2T8A6NH00 312 aa15.54■□□□□ 0.08
SDCBP-209ENST00000522243 DBX1A6NMT0 343 aa15.54■□□□□ 0.08
SDCBP-209ENST00000522243 M0QYG6 137 aa15.54■□□□□ 0.08
SDCBP-209ENST00000522243 CYB5BO43169 146 aa15.54■□□□□ 0.08
SDCBP-209ENST00000522243 TGOLN2O43493 480 aa15.54■□□□□ 0.08
SDCBP-209ENST00000522243 LPCAT3Q6P1A2 487 aa15.54■□□□□ 0.08
SDCBP-209ENST00000522243 HSD17B13Q7Z5P4 300 aaPredicted RBP15.54■□□□□ 0.08
SDCBP-209ENST00000522243 VN1R17PQ8TDU5 208 aa15.54■□□□□ 0.08
SDCBP-209ENST00000522243 F11RQ9Y624 299 aaKnown RBP15.54■□□□□ 0.08
SDCBP-209ENST00000522243 S100GP29377 79 aa15.53■□□□□ 0.08
SDCBP-209ENST00000522243 SLC16A13Q7RTY0 426 aa15.53■□□□□ 0.08
SDCBP-209ENST00000522243 OR52B4Q8NGK2 314 aa15.53■□□□□ 0.08
SDCBP-209ENST00000522243 PRNDQ9UKY0 176 aa15.53■□□□□ 0.08
SDCBP-209ENST00000522243 SMIM18P0DKX4 95 aa15.52■□□□□ 0.08
SDCBP-209ENST00000522243 C8orf88P0DMB2 117 aa15.52■□□□□ 0.08
SDCBP-209ENST00000522243 MZT2AQ6P582 158 aa15.52■□□□□ 0.08
SDCBP-209ENST00000522243 SCARB1Q8WTV0 552 aa15.52■□□□□ 0.08
SDCBP-209ENST00000522243 ZNF436Q9C0F3 470 aaPredicted RBP15.52■□□□□ 0.08
SDCBP-209ENST00000522243 MRPL27Q9P0M9 148 aaKnown RBP15.52■□□□□ 0.08
SDCBP-209ENST00000522243 UFC1Q9Y3C8 167 aa15.52■□□□□ 0.08
SDCBP-209ENST00000522243 RYR3Q15413 4870 aa15.52■□□□□ 0.07
SDCBP-209ENST00000522243 C15orf61A6NNL5 157 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 IGKV1-39P01597 117 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 IGKV1D-39P04432 117 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 CTF1Q16619 201 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 SLC38A6Q8IZM9 456 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 CADM3Q8N126 398 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 UBAC2Q8NBM4 344 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 OR5B3Q8NH48 314 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 MARC2Q969Z3 335 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 TMEM56Q96MV1 263 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 TSC22D3Q99576 134 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 FKBP11Q9NYL4 201 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 C21orf62Q9NYP8 219 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 KLK11Q9UBX7 282 aa15.51■□□□□ 0.07
SDCBP-209ENST00000522243 IGHV3OR16-8A0A075B7F1 116 aa15.5■□□□□ 0.07
SDCBP-209ENST00000522243 K7EIM0 57 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms