RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 TNCP24821 2201 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 FGF16O43320 207 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 ATP6V1G1O75348 118 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 IFNA4P05014 189 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 ATP6V0CP27449 155 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 SNCAP37840 140 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 DLK1P80370 383 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 VWC2Q2TAL6 325 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 LRRC75BQ2VPJ9 315 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 FAM74A1Q5RGS3 127 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 DYNAPQ8N1N2 210 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 COL12A1Q99715 3063 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 SRSF8Q9BRL6 282 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 MED9Q9NWA0 146 aa12.07□□□□□ -0.48
TRAPPC9-205ENST00000518839 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 FNDC10F2Z333 226 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 TSPAN9O75954 239 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 OPN1MWP04001 364 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 OPN1MW2P0DN77 364 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 OPN1MW3P0DN78 364 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 MYOD1P15172 320 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 TMEM11P17152 192 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 CNTFRP26992 372 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 COMPP49747 757 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 BPIFB3P59826 476 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 BLOC1S1P78537 153 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 TNXAQ16473 311 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 MRGPRG-AS1Q2M3A8 158 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 BSXQ3C1V8 233 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 Q8N6K4 173 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 RBMXL1Q96E39 390 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 WDR61Q9GZS3 305 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 PFDN2Q9UHV9 154 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 MED13LQ71F56 2210 aa12.06□□□□□ -0.48
TRAPPC9-205ENST00000518839 RNF223E7ERA6 249 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 TRIM77I1YAP6 450 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 SOX15O60248 233 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 CA2P00918 260 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 FAM157CP0CG43 387 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 SLC7A5P1Q8MH63 180 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 OR2G3Q8NGZ4 309 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 AJUBAQ96IF1 538 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 Q96MF0 132 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 TIMM9Q9Y5J7 89 aa12.05□□□□□ -0.48
TRAPPC9-205ENST00000518839 CR1P17927 2039 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 UBE2L5PA0A1B0GUS4 154 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 ZNF705EA8MWA4 302 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 MPDU1O75352 247 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 RNASE2P10153 161 aaKnown RBP12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 SERF2P84101 59 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 HNF4GQ14541 408 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 C5orf64Q2M2E5 130 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 C17orf50Q8WW18 174 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 TAF15Q92804 592 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 MEGF9Q9H1U4 602 aa12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAPPC9-205ENST00000518839 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 NUDT19A8MXV4 375 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 TGFAP01135 160 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 IGHV4-31P0DP07 118 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 PJVKQ0ZLH3 352 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 HIST2H2BCQ6DN03 193 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 ZNF114Q8NC26 417 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 OR10W1Q8NGF6 305 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 RNASEH2CQ8TDP1 164 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 TMEM170AQ8WVE7 144 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 PCNPQ8WW12 178 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 PARP11Q9NR21 331 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 FAM96BQ9Y3D0 163 aa12.03□□□□□ -0.48
TRAPPC9-205ENST00000518839 CNIH1O95406 144 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 PRH1P02810 166 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 OR13C7P0DN81 318 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 FGF7P21781 194 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 S100A1P23297 94 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 GNB1P62873 340 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 C10orf55Q5SWW7 151 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 AKR1C8PQ5T2L2 129 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 RUSC1-AS1Q66K80 236 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 TMEM182Q6ZP80 229 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 CENPVQ7Z7K6 275 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 COMMD7Q86VX2 200 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 KRTAP1-3Q8IUG1 177 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 ZNF709Q8N972 641 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 NPVFQ9HCQ7 196 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 KCNIP2Q9NS61 270 aa12.02□□□□□ -0.49
TRAPPC9-205ENST00000518839 WDR83OSQ9Y284 106 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms