RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ANKRD37Q7Z713 158 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 PIP4P1Q86T03 277 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 MEX3DQ86XN8 651 aaKnown RBP3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 ATOH7Q8N100 152 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 LINC01555Q8NAE3 123 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 SUMF1Q8NBK3 374 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR10AC1Q8NH08 325 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 OTOSQ8NHW6 89 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 H1FXQ92522 213 aaKnown RBP3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 FGF14Q92915 247 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 NAT6Q93015 286 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 NUS1Q96E22 293 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 MMABQ96EY8 250 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 DUX3Q96PT4 197 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 WFDC6Q9BQY6 131 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 TM2D2Q9BX73 214 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 GLIPR2Q9H4G4 154 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 PELI2Q9HAT8 420 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 PIGLQ9Y2B2 252 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR2W1Q9Y3N9 320 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 KCNE3Q9Y6H6 103 aa3.99□□□□□ -1.77
HMGB1P19-201ENST00000517578 ATG2AQ2TAZ0 1938 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TRAV27A0A087WT01 109 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A087X0K7 114 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 C3orf85A0A1B0GTC6 90 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 CXorf51AA0A1B0GTR3 108 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1B0GUS0 222 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 MED19A0JLT2 244 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 IZUMO1RA6ND01 250 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 C9JAW5 83 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 E9PLD3 99 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 C11orf98E9PRG8 122 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 K7ESF4 209 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 PAGE4O60829 102 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR2J3O76001 311 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 CST7O76096 145 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR2H2O95918 312 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 SLC25A5P05141 298 aaKnown RBP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF688P0C7X2 276 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 GATA2P23769 480 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 GATA3P23771 443 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRTN3P24158 256 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 CD38P28907 300 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 VDAC2P45880 294 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 CSN1S1P47710 185 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 CXCL12P48061 93 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 SEC61GP60059 68 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 MYBPHQ13203 477 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TBC1D28Q2M2D7 210 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 ETDBQ3ZM63 59 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TIGITQ495A1 244 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 FAM78AQ5JUQ0 283 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 IBA57Q5T440 356 aaKnown RBP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 LINC01590Q5TEZ4 76 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TSPO2Q5TGU0 170 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OTPQ5XKR4 325 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR4C11Q6IEV9 310 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 EBLN2Q6P2I7 272 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TCF23Q7RTU1 214 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 LYZL2Q7Z4W2 148 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 HAPLN4Q86UW8 402 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 LYPD6Q86Y78 171 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF683Q8IZ20 524 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 SPEM1Q8N4L4 309 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TEX45Q8NA69 505 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 SMRP1Q8NCR6 262 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR11H6Q8NGC7 330 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR10G7Q8NGN6 311 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR13A1Q8NGR1 328 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR1F12Q8NHA8 337 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 PFN4Q8NHR9 129 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 PIFOQ8TCI5 191 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TAF15Q92804 592 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TRIB1Q96RU8 372 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRADC1Q9BSG0 188 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 APOOQ9BUR5 198 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 RBM24Q9BX46 236 aaKnown RBP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TMEM222Q9H0R3 208 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 TAS2R4Q9NYW5 299 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 HIGD1AQ9Y241 93 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF835Q9Y2P0 537 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR1A2Q9Y585 309 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 R4GMQ9 66 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 R4GN57 208 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 SCN5AQ14524 2016 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 NUMA1Q14980 2115 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 KIF26AQ9ULI4 1882 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 DOCK4Q8N1I0 1966 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 PLXNB2O15031 1838 aa3.98□□□□□ -1.77
HMGB1P19-201ENST00000517578 NCKAP5O14513 1909 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 COL4A4P53420 1690 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 COL18A1P39060 1754 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 THSD7BQ9C0I4 1608 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 TRBV20-1A0A075B6N2 111 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A0B4J2E0 115 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1B0GVT2 93 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 A0A1B0GX12 115 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms