RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PKHD1L1Q86WI1 4243 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 FAT2Q9NYQ8 4349 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 ABCC5O15440 1437 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 SETD5Q9C0A6 1442 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 KNL1Q8NG31 2342 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 MEIKINA0A087WXM9 373 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 HMSDA8MTL9 139 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 ARL6IP5O75915 188 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 NDUFB2O95178 105 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 NPYP01303 97 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 RPSAP08865 295 aaKnown RBP0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 CARD18P57730 90 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 LRRC75BQ2VPJ9 315 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 MBD3L1Q8WWY6 194 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 POLR3HQ9Y535 204 aaPredicted RBP0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 RBM7Q9Y580 266 aaKnown RBP0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 ALMS1Q8TCU4 4167 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 CFTRP13569 1480 aa0.41□□□□□ -2.34
SCARNA1-201ENST00000517138 PBRM1Q86U86 1689 aa0.4□□□□□ -2.34
SCARNA1-201ENST00000517138 AKAP6Q13023 2319 aa0.4□□□□□ -2.35
SCARNA1-201ENST00000517138 CCL2P13500 99 aa0.4□□□□□ -2.35
SCARNA1-201ENST00000517138 LRRC20Q8TCA0 184 aa0.4□□□□□ -2.35
SCARNA1-201ENST00000517138 ITSN1Q15811 1721 aa0.4□□□□□ -2.35
SCARNA1-201ENST00000517138 KIAA0232Q92628 1395 aa0.4□□□□□ -2.35
SCARNA1-201ENST00000517138 LAMA4Q16363 1823 aa0.4□□□□□ -2.35
SCARNA1-201ENST00000517138 DNMBPQ6XZF7 1577 aa0.4□□□□□ -2.35
SCARNA1-201ENST00000517138 TRRAPQ9Y4A5 3859 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 MIA2Q96PC5 1412 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 A0A0G2JMZ2 1700 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 MAP2P11137 1827 aaKnown RBP0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 HRNRQ86YZ3 2850 aaPredicted RBP0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 IGHV1-18A0A0C4DH31 117 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 KLRC4O43908 158 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 SERPINA7P05543 415 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 NQO2P16083 231 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 LCN1P31025 176 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 GNA12Q03113 381 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 TMEM267Q0VDI3 215 aaPredicted RBP0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 ARHGAP11BQ3KRB8 267 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 FAM173BQ6P4H8 233 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 LYZL1Q6UWQ5 148 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 LRRC34Q8IZ02 419 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 ST13P4Q8IZP2 240 aaPredicted RBP0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 C9orf163Q8N9P6 203 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 NMNAT3Q96T66 252 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 HBEGFQ99075 208 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 UGT2B28Q9BY64 529 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 UBQLN4Q9NRR5 601 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 MLH3Q9UHC1 1453 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 LTN1O94822 1766 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 URB1O60287 2271 aaKnown RBP0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 ABCA1O95477 2261 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 STARD9Q9P2P6 4700 aa0.39□□□□□ -2.35
SCARNA1-201ENST00000517138 NPATQ14207 1427 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 AKAP11Q9UKA4 1901 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 PLECQ15149 4684 aaKnown RBP0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 WNK2Q9Y3S1 2297 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 SBF1O95248 1867 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 ZNF831Q5JPB2 1677 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 RAPGEF2Q9Y4G8 1499 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 SULT1C2O00338 296 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 MPZL2O60487 215 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 UGT2B11O75310 529 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 TNFAIP8O95379 198 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 AGTR1P30556 359 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 GABRA2P47869 451 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 ZNF705AQ6ZN79 300 aaPredicted RBP0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 CNPY4Q8N129 248 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 ABCA6Q8N139 1617 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 ASXL1Q8IXJ9 1541 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 ARHGEF12Q9NZN5 1544 aa0.38□□□□□ -2.35
SCARNA1-201ENST00000517138 A0A0D9SEW6 157 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 TRAPPC13A5PLN9 417 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 M0R381 172 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 HBZP02008 142 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 GP1BAP07359 652 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 SLC35E2BP0CK96 405 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 TMEM249Q2WGJ8 235 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 SCGB1D4Q6XE38 83 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 BAP18Q8IXM2 172 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 NATD1Q8N6N6 113 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 ZNF675Q8TD23 568 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 SLC7A6Q92536 515 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 RORBQ92753 470 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 OR7D2Q96RA2 312 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 IMMP2LQ96T52 175 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 PLCH1Q4KWH8 1693 aa0.37□□□□□ -2.35
SCARNA1-201ENST00000517138 TNRC6BQ9UPQ9 1833 aaKnown RBP0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 PXDNQ92626 1479 aa0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 A0A087WUU8 490 aa0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 LCN8Q6JVE9 175 aa0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 SLC13A5Q86YT5 568 aaPredicted RBP0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 SERPINB11Q96P15 392 aa0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 TRIM4Q9C037 500 aa0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 TOPAZ1Q8N9V7 1692 aa0.36□□□□□ -2.35
SCARNA1-201ENST00000517138 GOLGA3Q08378 1498 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 MYO3AQ8NEV4 1616 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 HUWE1Q7Z6Z7 4374 aaKnown RBP0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 PRDM15P57071 1507 aaPredicted RBP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms