RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 FBXO24O75426 580 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IFNA4P05014 189 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SEC11BP0C7V7 166 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FAM106CPP0CH98 169 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CD24P25063 80 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NPY1RP25929 384 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CHRNA7P36544 502 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ATP5IP56385 69 aaPredicted RBP6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ERHP84090 104 aaKnown RBP6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ARL16Q0P5N6 197 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PJVKQ0ZLH3 352 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 EBI3Q14213 229 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MMDQ15546 238 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TNXAQ16473 311 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ATP6V1FQ16864 119 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FAM74A1Q5RGS3 127 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 C10orf55Q5SWW7 151 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 THNSL2Q86YJ6 484 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MRPL41Q8IXM3 137 aaKnown RBP6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PIP4P2Q8N4L2 257 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 HSD17B11Q8NBQ5 300 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NPBQ8NG41 125 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 LRRC20Q8TCA0 184 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SCGB1C1Q8TD33 95 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PCNPQ8WW12 178 aaKnown RBP6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 C17orf50Q8WW18 174 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 GNPNAT1Q96EK6 184 aaPredicted RBP6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 AJUBAQ96IF1 538 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SLC25A32Q9H2D1 315 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FBXL15Q9H469 300 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NDUFA4L2Q9NRX3 87 aa6.12□□□□□ -1.43
SCARNA20.1-201ENST00000516009 UBE2L5PA0A1B0GUS4 154 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 INS-IGF2F8WCM5 200 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NDUFA3O95167 84 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CA2P00918 260 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TGFAP01135 160 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NMBP08949 121 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGHV4-38-2P0DP08 117 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TMEM11P17152 192 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ATP6V0CP27449 155 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SNCAP37840 140 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RPL27AP46776 148 aaKnown RBP6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 COMPP49747 757 aaPredicted RBP6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 GNB1P62873 340 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MRGPRG-AS1Q2M3A8 158 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TMEM249Q2WGJ8 235 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RUSC1-AS1Q66K80 236 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 BRD3OSQ6XYD6 125 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ETV3LQ6ZN32 361 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 KRTAP1-3Q8IUG1 177 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 Q8N6K4 173 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 MAPK1IP1LQ8NDC0 245 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR10W1Q8NGF6 305 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RNF141Q8WVD5 230 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TMEM147Q9BVK8 224 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 UQCC1Q9NVA1 299 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 C1RLQ9NZP8 487 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CSMD2Q7Z408 3487 aa6.11□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NAV3Q8IVL0 2385 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PRRC2AP48634 2157 aaKnown RBP6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NBPF19A0A087WUL8 3843 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 A0A0U1RQK1 487 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 LINC00862A6NCI5 91 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CGB1A6NKQ9 187 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 NCBP2LA6PVI3 153 aaKnown RBP6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 E7EUB6 86 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ATP6V1G1O75348 118 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 CNIH1O95406 144 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 OR13C7P0DN81 318 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGHV4-31P0DP07 118 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RNASE2P10153 161 aaKnown RBP6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SPP1P10451 314 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SULT1A2P50226 295 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SUB1P53999 127 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RUNX1Q01196 453 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 C5orf64Q2M2E5 130 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 C2orf83Q53S99 150 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 TMEM170AQ8WVE7 144 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 GGACTQ9BVM4 153 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PARD6GQ9BYG4 376 aaPredicted RBP6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 WDR61Q9GZS3 305 aaKnown RBP6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SH3BGRL3Q9H299 93 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FAM96BQ9Y3D0 163 aa6.1□□□□□ -1.43
SCARNA20.1-201ENST00000516009 A0A1B0GW64 132 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 IGLC7A0M8Q6 106 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 SMCO3A2RU48 225 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 ZNF705EA8MWA4 302 aaPredicted RBP6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 UMAD1C9J7I0 102 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PRSS46E5RG02 174 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FCN1O00602 326 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FGF16O43320 207 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 AVPP01185 164 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 PRH1P02810 166 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FBP1P09467 338 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FAM157CP0CG43 387 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 FGF7P21781 194 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 RAB5CP51148 216 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 BPIFB3P59826 476 aa6.09□□□□□ -1.43
SCARNA20.1-201ENST00000516009 DLK1P80370 383 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms