RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 TRAV40A0A0B4J280 105 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 RPS10-NUDT3A0A1W2PQS6 291 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 BTBD17A6NE02 478 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 NCBP2LA6PVI3 153 aaKnown RBP7.62□□□□□ -1.19
TPM3-222ENST00000515609 RNF223E7ERA6 249 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 MBP02144 154 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 KRTAP10-9P60411 292 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 TMEM267Q0VDI3 215 aaPredicted RBP7.62□□□□□ -1.19
TPM3-222ENST00000515609 TNXAQ16473 311 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 C5orf64Q2M2E5 130 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 TMEM249Q2WGJ8 235 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 C2orf83Q53S99 150 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 C16orf82Q7Z2V1 217 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 LHFPL4Q7Z7J7 247 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 ZDHHC16Q969W1 377 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 TMEM68Q96MH6 324 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 RASL11BQ9BPW5 248 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
TPM3-222ENST00000515609 PFDN2Q9UHV9 154 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 TIMM9Q9Y5J7 89 aa7.62□□□□□ -1.19
TPM3-222ENST00000515609 TRAV3A0A0B4J244 114 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 A0A1W2PRD5 423 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 A0A1W2PRF3 423 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 A0A1W2PRM7 423 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 KCNAB3O43448 404 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 SCGB2A1O75556 95 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 PRH1P02810 166 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 CRYGBP07316 175 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 SPP1P10451 314 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 GPX4P36969 197 aaPredicted RBP7.61□□□□□ -1.19
TPM3-222ENST00000515609 LRRC75BQ2VPJ9 315 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 AKR1C8PQ5T2L2 129 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 ZNF562Q6V9R5 426 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 ZNF114Q8NC26 417 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 TMED6Q8WW62 240 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 NPVFQ9HCQ7 196 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 MED9Q9NWA0 146 aa7.61□□□□□ -1.19
TPM3-222ENST00000515609 RELNP78509 3460 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 A0A096LNT2 108 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 C15orf62A8K5M9 175 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 FGF16O43320 207 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 CFDP00746 253 aaPredicted RBP7.6□□□□□ -1.19
TPM3-222ENST00000515609 OR13C7P0DN81 318 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 SULT1A2P50226 295 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 DLX1P56177 255 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 HNF4GQ14541 408 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 VWC2Q2TAL6 325 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 Q8N6K4 173 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 HSD17B11Q8NBQ5 300 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 OR2G3Q8NGZ4 309 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 OR1P1Q8NH06 330 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 OR5R1Q8NH85 324 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 OR4C12Q96R67 309 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 WDR61Q9GZS3 305 aaKnown RBP7.6□□□□□ -1.19
TPM3-222ENST00000515609 FBXL15Q9H469 300 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 THYN1Q9P016 225 aa7.6□□□□□ -1.19
TPM3-222ENST00000515609 USP9YO00507 2555 aaPredicted RBP7.6□□□□□ -1.19
TPM3-222ENST00000515609 ZNF705EA8MWA4 302 aaPredicted RBP7.59□□□□□ -1.19
TPM3-222ENST00000515609 FBXO24O75426 580 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 CA2P00918 260 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 HLA-DRB1P01911 266 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 FABP1P07148 127 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 IGHV4-31P0DP07 118 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 DEFA4P12838 97 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 HNF1AP20823 631 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 S100A1P23297 94 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 GNB1P62873 340 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 PRB3Q04118 309 aaPredicted RBP7.59□□□□□ -1.19
TPM3-222ENST00000515609 FXYD3Q14802 87 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 BSXQ3C1V8 233 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 SPINK9Q5DT21 86 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 PXDC1Q5TGL8 231 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 TEPPQ6URK8 271 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 COMMD1Q8N668 190 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 LFNGQ8NES3 379 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 ABHD5Q8WTS1 349 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 SRSF12Q8WXF0 261 aaKnown RBP7.59□□□□□ -1.19
TPM3-222ENST00000515609 TAF15Q92804 592 aaKnown RBP eCLIP7.59□□□□□ -1.19
TPM3-222ENST00000515609 SLC35E1Q96K37 410 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 MOB4Q9Y3A3 225 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 LRBAP50851 2863 aa7.59□□□□□ -1.19
TPM3-222ENST00000515609 UBE2L5PA0A1B0GUS4 154 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 SMCO3A2RU48 225 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 LINC00862A6NCI5 91 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 HBE1P02100 147 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 HIST1H1BP16401 226 aaKnown RBP7.58□□□□□ -1.2
TPM3-222ENST00000515609 FGF7P21781 194 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 ATP6V0CP27449 155 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 CAMLGP49069 296 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 AKR1C1Q04828 323 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 LDLRAD2Q5SZI1 272 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 C9orf139Q6ZV77 190 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 CENPVQ7Z7K6 275 aaPredicted RBP7.58□□□□□ -1.2
TPM3-222ENST00000515609 S100A7AQ86SG5 101 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 ARPC1AQ92747 370 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 AJUBAQ96IF1 538 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 RBM14Q96PK6 669 aaKnown RBP7.58□□□□□ -1.2
TPM3-222ENST00000515609 SSX3Q99909 188 aa7.58□□□□□ -1.2
TPM3-222ENST00000515609 C19orf24Q9BVV8 132 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms