RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 IL36BQ9NZH7 164 aa0.56□□□□□ -2.32
NEDD4-211ENST00000514893 AK3Q9UIJ7 227 aa0.56□□□□□ -2.32
NEDD4-211ENST00000514893 MED13Q9UHV7 2174 aa0.56□□□□□ -2.32
NEDD4-211ENST00000514893 PRRC2BQ5JSZ5 2229 aaKnown RBP0.56□□□□□ -2.32
NEDD4-211ENST00000514893 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
NEDD4-211ENST00000514893 TRBV20OR9-2A0A075B6H5 130 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 TRBV10-2A0A0K0K1G8 114 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 OR51F1A6NGY5 319 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 SLC16A4O15374 487 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 PMP2P02689 132 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 CALB1P05937 261 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 EVX1P49640 407 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 NAA20P61599 178 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 SUPT4H1P63272 117 aaKnown RBP0.55□□□□□ -2.32
NEDD4-211ENST00000514893 PLCXD2Q0VAA5 305 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 Q1T7F1 81 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 CLVS2Q5SYC1 327 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 LPCAT4Q643R3 524 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 LRRN1Q6UXK5 716 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 CLVS1Q8IUQ0 354 aaPredicted RBP0.55□□□□□ -2.32
NEDD4-211ENST00000514893 IQCF2Q8IXL9 164 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 OR2T4Q8NH00 348 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 OPTNQ96CV9 577 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 CMTM6Q9NX76 183 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 OR5AC2Q9NZP5 309 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 BAIAP2Q9UQB8 552 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 PKIGQ9Y2B9 76 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 LSM5Q9Y4Y9 91 aaKnown RBP0.55□□□□□ -2.32
NEDD4-211ENST00000514893 GREB1Q4ZG55 1949 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 PTPRBP23467 1997 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 ABCC11Q96J66 1382 aa0.55□□□□□ -2.32
NEDD4-211ENST00000514893 PTPRSQ13332 1948 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 CCDC88CQ9P219 2028 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 MDC1Q14676 2089 aaKnown RBP0.54□□□□□ -2.32
NEDD4-211ENST00000514893 TRAV1-1A0A0B4J248 108 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 IGKV1-9A0A0C4DH69 117 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 A0A1B0GW54 56 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 PQLC2LA1A4F0 135 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 IRGMA1A4Y4 181 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 TRAPPC13A5PLN9 417 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 FABP5P3A8MUU1 101 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 IBA57-AS1B1ANH7 110 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 F8W036 122 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 ACOX3O15254 700 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 CRYZL1O95825 349 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 CCL5P13501 91 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 SPI1P17947 270 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 MARCKSL1P49006 195 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 KRTAP10-4P60372 401 aaPredicted RBP0.54□□□□□ -2.32
NEDD4-211ENST00000514893 SPCS3P61009 180 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 CAV1Q03135 178 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 RPL18Q07020 188 aaKnown RBP0.54□□□□□ -2.32
NEDD4-211ENST00000514893 MED21Q13503 144 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 ZNF345Q14585 488 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 KHDC3LQ587J8 217 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 CDKL4Q5MAI5 379 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 C10orf55Q5SWW7 151 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 AADACL3Q5VUY0 350 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 OOSP2Q86WS3 158 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 Q8N2B8 174 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 TMEM156Q8N614 296 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 DEFB125Q8N687 156 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 ZNF565Q8N9K5 539 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 TMEM106AQ96A25 262 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 ROPN1LQ96C74 230 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 ODF3Q96PU9 254 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 RETNLBQ9BQ08 111 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 SLC50A1Q9BRV3 221 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 TMEM147Q9BVK8 224 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 YIPF3Q9GZM5 350 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 WDR61Q9GZS3 305 aaKnown RBP0.54□□□□□ -2.32
NEDD4-211ENST00000514893 XAGE1AQ9HD64 81 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 XPNPEP1Q9NQW7 623 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 CISHQ9NSE2 258 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 C22orf24Q9Y442 160 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 SNURFQ9Y675 71 aa0.54□□□□□ -2.32
NEDD4-211ENST00000514893 FN1P02751 2386 aaKnown RBP0.53□□□□□ -2.32
NEDD4-211ENST00000514893 IGKV1D-42A0A075B6H8 117 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 TGIF2-C20orf24A0A0A6YYL0 155 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 A0A1B0GV50 99 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 FUOMA2VDF0 154 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 INMT-MINDY4F8WBC2 141 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 PSMD12O00232 456 aaPredicted RBP0.53□□□□□ -2.32
NEDD4-211ENST00000514893 GEMIN2O14893 280 aaKnown RBP0.53□□□□□ -2.32
NEDD4-211ENST00000514893 HCRTO43612 131 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 MRPS14O60783 128 aaKnown RBP0.53□□□□□ -2.32
NEDD4-211ENST00000514893 OR5F1O95221 314 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 PRM2P04554 102 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 ASAH2BP0C7U1 165 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 METTL15P1P0C7V9 234 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 CRYGAP11844 174 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 NFYAP23511 347 aaPredicted RBP0.53□□□□□ -2.32
NEDD4-211ENST00000514893 HIST1H2BOP23527 126 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 FKBP2P26885 142 aaKnown RBP0.53□□□□□ -2.32
NEDD4-211ENST00000514893 BRS3P32247 399 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 HIST1H2BBP33778 126 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 HIST1H2BDP58876 126 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 POLR2GP62487 172 aaKnown RBP eCLIP0.53□□□□□ -2.32
NEDD4-211ENST00000514893 HIST1H2BCP62807 126 aa0.53□□□□□ -2.32
NEDD4-211ENST00000514893 HBA1P69905 142 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms