RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZNF676Q8N7Q3 588 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 OR2T4Q8NH00 348 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 KLK6Q92876 244 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 OPTNQ96CV9 577 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 ARL5BQ96KC2 179 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 ERMAPQ96PL5 475 aaPredicted RBP1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 RETNLBQ9BQ08 111 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 CYSTM1Q9H1C7 97 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 CST9LQ9H4G1 147 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 FUT9Q9Y231 359 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 ANGPT4Q9Y264 503 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 HECW1Q76N89 1606 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 RP1P56715 2156 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 PLXND1Q9Y4D7 1925 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 GGT3PA6NGU5 568 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 ORC5O43913 435 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 NIPSNAP2O75323 286 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 TRGC1P0CF51 173 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 PTRHD1Q6GMV3 140 aaKnown RBP1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 ANKRD7Q92527 254 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 CNBD2Q96M20 576 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 RSL24D1Q9UHA3 163 aaKnown RBP1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 TENM1Q9UKZ4 2725 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 FLG2Q5D862 2391 aaPredicted RBP1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 GLI3P10071 1580 aa1.42□□□□□ -2.18
HMGCS1-207ENST00000514610 ECM29Q5VYK3 1845 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 MEIKINA0A087WXM9 373 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 TGIF2-C20orf24A0A0A6YYL0 155 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 A0A0J9YY10 115 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 A0A1B0GX78 115 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 MEIS3P1A6NDR6 274 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 IBA57-AS1B1ANH7 110 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 DCTN3O75935 186 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 MSMBP08118 114 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 SRP19P09132 144 aaKnown RBP1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 KCNE1P15382 129 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 RAB5BP61020 215 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 ROPN1LQ96C74 230 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 CMTM6Q9NX76 183 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 LSM5Q9Y4Y9 91 aaKnown RBP1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 KIF24Q5T7B8 1368 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 HECW2Q9P2P5 1572 aa1.41□□□□□ -2.18
HMGCS1-207ENST00000514610 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 KCNK1O00180 336 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 ARL14EPLP0DKL9 152 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 SULT1A3P0DMM9 295 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 SULT1A4P0DMN0 295 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 IFITM2Q01629 132 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 CAV1Q03135 178 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 GUK1Q16774 197 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 HIST2H3PS2Q5TEC6 136 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 ALKAL1Q6UXT8 129 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 TMEM86AQ8N2M4 240 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 C15orf53Q8NAA6 179 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 C10orf105Q8TEF2 133 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 MBD3L1Q8WWY6 194 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 SLC35B4Q969S0 331 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 CISHQ9NSE2 258 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 V9GYY5 206 aaPredicted RBP1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 DCCP43146 1447 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 COL6A6A6NMZ7 2263 aa1.4□□□□□ -2.19
HMGCS1-207ENST00000514610 TRAPPC13A5PLN9 417 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 EEF1E1-BLOC1S5C9J1V9 151 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 IGHV3-7P01780 117 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 HIST1H1EP10412 219 aaKnown RBP1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 SPCS3P61009 180 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 PMAIP1Q13794 54 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 GRK1Q15835 563 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 LPCAT4Q643R3 524 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 GLT8D1Q68CQ7 371 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 UNQ6190/PRO20217Q6UXQ8 127 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 TMEM86BQ8N661 226 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 EFCAB1Q9HAE3 211 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 PARVGQ9HBI0 331 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 IL36BQ9NZH7 164 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 SMARCA4P51532 1647 aa1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 ZNF106Q9H2Y7 1883 aaKnown RBP1.39□□□□□ -2.19
HMGCS1-207ENST00000514610 ANAPC1Q9H1A4 1944 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 ARFGEF3Q5TH69 2177 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 ADCY9O60503 1353 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 TRBV20OR9-2A0A075B6H5 130 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 TRBV10-2A0A0K0K1G8 114 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 LYPLA2O95372 231 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 AHSA1O95433 338 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 RPSAP08865 295 aaKnown RBP1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 FGF6P10767 208 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 EIF2B2P49770 351 aaKnown RBP1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 RPL18Q07020 188 aaKnown RBP1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 ITGB3BPQ13352 177 aaPredicted RBP1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 OR2F1Q13607 317 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 Q6ZS49 121 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 UBAP1Q9NZ09 502 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 PKIGQ9Y2B9 76 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 LHFPL6Q9Y693 200 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 SCN10AQ9Y5Y9 1956 aa1.38□□□□□ -2.19
HMGCS1-207ENST00000514610 A0A1B0GV50 99 aa1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 F8W036 122 aa1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 NOS1APO75052 506 aaPredicted RBP1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 SUPT4H1P63272 117 aaKnown RBP1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 ELOBQ15370 118 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms