RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ATP6V1FQ16864 119 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 TMEM14EPQ6UXP3 125 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 TMEM252Q8N6L7 170 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 UBAC2Q8NBM4 344 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 NPBQ8NG41 125 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 OR2T10Q8NGZ9 312 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 HIPK2Q9H2X6 1198 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 RBKSQ9H477 322 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 NUP50Q9UKX7 468 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 PAIP2BQ9ULR5 123 aaKnown RBP7.31□□□□□ -1.24
NR1I3-228ENST00000511676 TCF19Q9Y242 345 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 YLPM1P49750 1951 aaKnown RBP7.31□□□□□ -1.24
NR1I3-228ENST00000511676 CENPVL3A0A0U1RRI6 287 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 SRRM4A7MD48 611 aaKnown RBP7.3□□□□□ -1.24
NR1I3-228ENST00000511676 FNDC10F2Z333 226 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 TMEM50AO95807 157 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 IFNA17P01571 189 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 CRYGBP07316 175 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 SAA4P35542 130 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 VDAC2P45880 294 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-228ENST00000511676 KLRD1Q13241 179 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 DIAPH2-AS1Q14236 149 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 NDUFA5Q16718 116 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 MOB3BQ86TA1 216 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 Q8N6K4 173 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 ZNF680Q8NEM1 530 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 OR1L8Q8NGR8 309 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 LRRC20Q8TCA0 184 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 PINX1Q96BK5 328 aaKnown RBP7.3□□□□□ -1.24
NR1I3-228ENST00000511676 GGACTQ9BVM4 153 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 QTRT1Q9BXR0 403 aaKnown RBP7.3□□□□□ -1.24
NR1I3-228ENST00000511676 COMMD5Q9GZQ3 224 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 ARV1Q9H2C2 271 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 ZC4H2Q9NQZ6 224 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 PSENENQ9NZ42 101 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 UBQLN2Q9UHD9 624 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 STRAPQ9Y3F4 350 aaKnown RBP7.3□□□□□ -1.24
NR1I3-228ENST00000511676 OR51B2Q9Y5P1 312 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 DOCK11Q5JSL3 2073 aa7.3□□□□□ -1.24
NR1I3-228ENST00000511676 IGSF23A1L1A6 192 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 CEBPZOSA8MTT3 80 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 RRHO14718 337 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 NBR2O15453 112 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 SOX15O60248 233 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 SNRNP70P08621 437 aaKnown RBP7.29□□□□□ -1.24
NR1I3-228ENST00000511676 FAM106CPP0CH98 169 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 HTR2BP41595 481 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 PSG5Q15238 335 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 PRSS8Q16651 343 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 IZUMO4Q1ZYL8 232 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 BSXQ3C1V8 233 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 LDLRAD2Q5SZI1 272 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 C9orf139Q6ZV77 190 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 IL17RELQ6ZVW7 336 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 SSX9Q7RTT3 188 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 PPP1R27Q86WC6 154 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 OR1S2Q8NGQ3 325 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 SCARB1Q8WTV0 552 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 AJUBAQ96IF1 538 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 ZNF471Q9BX82 626 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-228ENST00000511676 MAGT1Q9H0U3 335 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 MEGF9Q9H1U4 602 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 PLEKHA3Q9HB20 300 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 ENY2Q9NPA8 101 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 NDUFA4L2Q9NRX3 87 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 C1RLQ9NZP8 487 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 KIAA1456Q9P272 454 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 FBXL17Q9UF56 701 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 SIGLEC9Q9Y336 463 aa7.29□□□□□ -1.24
NR1I3-228ENST00000511676 CRYBA1P05813 215 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 FBP1P09467 338 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 OR8U8P0C7N1 319 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 HOXA1P49639 335 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-228ENST00000511676 F2RL1P55085 397 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 OR2B8PP59922 312 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 RAB11AP62491 216 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 LHFPL4Q7Z7J7 247 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 VKORC1L1Q8N0U8 176 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 ZNF114Q8NC26 417 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-228ENST00000511676 EAF1Q96JC9 268 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-228ENST00000511676 ATP5SQ99766 215 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 ZNF747Q9BV97 191 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 C7orf69Q9H7B7 122 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 HEYLQ9NQ87 328 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-228ENST00000511676 CYTL1Q9NRR1 136 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 HILPDAQ9Y5L2 63 aa7.28□□□□□ -1.24
NR1I3-228ENST00000511676 TRAV3A0A0B4J244 114 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 TEX50A0A1B0GTY4 177 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 FAM24AA6NFZ4 105 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 SLC25A17O43808 307 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 MPDU1O75352 247 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 ACTL6BO94805 426 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 FSHBP01225 129 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 SEC11BP0C7V7 166 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 IAPPP10997 89 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-228ENST00000511676 RAB5CP51148 216 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms