RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 NUDCD2Q8WVJ2 157 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 FCGR1BQ92637 280 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 C20orf24Q9BUV8 137 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 ATG5Q9H1Y0 275 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 THYN1Q9P016 225 aa11.75□□□□□ -0.53
CXCL1-202ENST00000509101 DNAH17Q9UFH2 4485 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 TRAV1-2A0A0B4J238 106 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 SMIM30A4D0T7 59 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 MPTX1A8MV57 137 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 PDCD5O14737 125 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 ZNF66Q6ZN08 573 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 OR11H2Q8NH07 326 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 OR4A5Q8NH83 315 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 CSTL1Q9H114 145 aa11.74□□□□□ -0.53
CXCL1-202ENST00000509101 TXNL4BQ9NX01 149 aaKnown RBP11.74□□□□□ -0.53
CXCL1-202ENST00000509101 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 DEFB4AO15263 64 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 ARL6IP1Q15041 203 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 CDNFQ49AH0 187 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 CNIH2Q6PI25 160 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 SPAG16Q8N0X2 631 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 OR10W1Q8NGF6 305 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
CXCL1-202ENST00000509101 CHRDL1Q9BU40 450 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 COMMD5Q9GZQ3 224 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 RNF167Q9H6Y7 350 aa11.73□□□□□ -0.53
CXCL1-202ENST00000509101 NDUFA4O00483 81 aa11.72□□□□□ -0.53
CXCL1-202ENST00000509101 RAB3BP20337 219 aa11.72□□□□□ -0.53
CXCL1-202ENST00000509101 MYL9P24844 172 aa11.72□□□□□ -0.53
CXCL1-202ENST00000509101 FGF9P31371 208 aaPredicted RBP11.72□□□□□ -0.53
CXCL1-202ENST00000509101 TFPI2P48307 235 aa11.72□□□□□ -0.53
CXCL1-202ENST00000509101 HACD4Q5VWC8 232 aa11.72□□□□□ -0.53
CXCL1-202ENST00000509101 GDPD1Q8N9F7 314 aa11.72□□□□□ -0.53
CXCL1-202ENST00000509101 SECTM1Q8WVN6 248 aa11.72□□□□□ -0.53
CXCL1-202ENST00000509101 ABCA13Q86UQ4 5058 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 MUC4Q99102 2169 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 TMEM235A6NFC5 223 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 IGLL5B9A064 214 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 UPK2O00526 184 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 CYB5BO43169 146 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 TCTAP57738 103 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 SLC25A24Q6NUK1 477 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 RNF2Q99496 336 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 SRSF8Q9BRL6 282 aaKnown RBP11.71□□□□□ -0.53
CXCL1-202ENST00000509101 AIFM2Q9BRQ8 373 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 QTRT1Q9BXR0 403 aaKnown RBP11.71□□□□□ -0.53
CXCL1-202ENST00000509101 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 ANXA10Q9UJ72 324 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
CXCL1-202ENST00000509101 DYNC1H1Q14204 4646 aaKnown RBP11.71□□□□□ -0.54
CXCL1-202ENST00000509101 SULT1C2O00338 296 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 XRCC3O43542 346 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 CA1P00915 261 aaPredicted RBP11.7□□□□□ -0.54
CXCL1-202ENST00000509101 CLEC2LP0C7M8 214 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 OR13C7P0DN81 318 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 ADMP35318 185 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 MFAP2P55001 183 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 TAS2R31P59538 309 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 GNG2P59768 71 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 C21orf62Q9NYP8 219 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 SSR3Q9UNL2 185 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 DNAH11Q96DT5 4516 aa11.7□□□□□ -0.54
CXCL1-202ENST00000509101 IGHV3-49A0A0A0MS15 119 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
CXCL1-202ENST00000509101 K7EMT4 169 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
CXCL1-202ENST00000509101 SSX5O60225 188 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 SERPINE2P07093 398 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 NQO2P16083 231 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 WT1-ASQ06250 92 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 POU2AF1Q16633 256 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 GVQW1Q8N7I0 195 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 DMBX1Q8NFW5 382 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 TSPAN14Q8NG11 270 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 OR13F1Q8NGS4 319 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 ETV7Q9Y603 341 aa11.69□□□□□ -0.54
CXCL1-202ENST00000509101 LOC100506127A0A0U1RQW1 187 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 C15orf62A8K5M9 175 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 TNFAIP8O95379 198 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 HPRT1P00492 218 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 PTHLHP12272 177 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 SDC2P34741 201 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 TGFBR1P36897 503 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 ARPC4P59998 168 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 CATR1Q13166 79 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 Q56UQ5 140 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 THOC7Q6I9Y2 204 aaKnown RBP11.68□□□□□ -0.54
CXCL1-202ENST00000509101 LINC00336Q6ZUF6 198 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 SCARB1Q8WTV0 552 aa11.68□□□□□ -0.54
CXCL1-202ENST00000509101 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms