RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 IFNA10P01566 189 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 PRM2P04554 102 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 C8GP07360 202 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 GZMHP20718 246 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 MSNP26038 577 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 CCR2P41597 374 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 HIST1H4AP62805 103 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 RUNX1Q01196 453 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 MEF2BQ02080 365 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 MIAQ16674 131 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 TRIQKQ629K1 86 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 RPL22L1Q6P5R6 122 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 SLC36A1Q7Z2H8 476 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 LINC00304Q8N9R0 145 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 FAM172AQ8WUF8 416 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 DNAJC9Q8WXX5 260 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 PKMYT1Q99640 499 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 C16orf95Q9H693 158 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 TUBA4BQ9H853 241 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 NAT8Q9UHE5 227 aa2.12□□□□□ -2.07
TRAPPC13-209ENST00000508304 NLRC5Q86WI3 1866 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 SHANK1Q9Y566 2161 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 IGKV3D-11A0A0A0MRZ8 115 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 TRGV5A0A0B4J1U4 118 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 A0A1W2PNM2 257 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 IRGMA1A4Y4 181 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 TMEM238C9JI98 176 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 ZNF189O75820 626 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 IGKV4-1P06312 121 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 SMIM17P0DL12 118 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 PPIBP23284 216 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 PSMB8P28062 276 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 HLA-DMBP28068 263 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 EIF2B2P49770 351 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 EMP1P54849 157 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 AADACL3Q5VUY0 350 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 ZNF676Q8N7Q3 588 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 OR5J2Q8NH18 312 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 OR13C6PQ8NH95 151 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 NEK7Q8TDX7 302 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 SMCR5Q8TEV8 140 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 TOMM6Q96B49 74 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 NIPSNAP1Q9BPW8 284 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 GINS4Q9BRT9 223 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 RNASE7Q9H1E1 156 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 TRABDQ9H4I3 376 aa2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 UTP11Q9Y3A2 253 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 TRPM3Q9HCF6 1732 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC13-209ENST00000508304 ABCC12Q96J65 1359 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 ADAMTSL1Q8N6G6 1762 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 DSCAMO60469 2012 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 ITGB4P16144 1822 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 CACNA1SQ13698 1873 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 IGHV3-15A0A0B4J1V0 119 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 A0A0J9YW62 118 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 FABP5P3A8MUU1 101 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 FNDC10F2Z333 226 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 G3V2T6 193 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 H3BT86 120 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 GNRH2O43555 120 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 S1PR2O95136 353 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 IFNA1P01562 189 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 FABP1P07148 127 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 CD24P25063 80 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 S100A4P26447 101 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 DEFA3P59666 94 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 TPI1P60174 286 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 DR1Q01658 176 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 RPL18Q07020 188 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 SNCBQ16143 134 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 AGTRAPQ6RW13 159 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 KRTAP13-1Q8IUC0 172 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 OR51T1Q8NGJ9 327 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 IMMP2LQ96T52 175 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 PRRT1Q99946 306 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 SLC39A9Q9NUM3 307 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 PYCARDQ9ULZ3 195 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 UNC13AQ9UPW8 1703 aa2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 EIF3AQ14152 1382 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-209ENST00000508304 LCTP09848 1927 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 IGLV10-54A0A075B6I4 117 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 TRAV38-1A0A0B4J264 116 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 SLC22A1O15245 554 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 TFPTP0C1Z6 253 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 ZNF728P0DKX0 622 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 SULT1A3P0DMM9 295 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 SULT1A4P0DMN0 295 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 CASP1P29466 404 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 CCL20P78556 96 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 ERHP84090 104 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 C12orf74Q32Q52 190 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 PABPC1L2AQ5JQF8 200 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 SPANXN3Q5MJ09 141 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 LYRM7Q5U5X0 104 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 GOLT1AQ6ZVE7 132 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 ZNF283Q8N7M2 679 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 OR13C4Q8NGS5 318 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 SLC25A40Q8TBP6 338 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 PHOSPHO2Q8TCD6 241 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms