RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 A0A0B4J293 547 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 A0A0G2JRQ6 117 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 A0A1B0GU03 582 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 TCRBV4S1A1TA0A5B7 111 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 C5orf51A6NDU8 294 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 CEBPZOSA8MTT3 80 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 E7EUB6 86 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 ST8SIA3O43173 380 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 WIPF1O43516 503 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 SSNA1O43805 119 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 ADAP1O75689 374 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 REG1AP05451 166 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 PF4V1P10720 104 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 CD28P10747 220 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 HOXA1P49639 335 aaPredicted RBP6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 HSPE1P61604 102 aaKnown RBP6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 ERHP84090 104 aaKnown RBP6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 SMCO1Q147U7 214 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 SPINK9Q5DT21 86 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 C10orf99Q6UWK7 81 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 ZNF429Q86V71 674 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 COMMD1Q8N668 190 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 OR5M8Q8NGP6 311 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 MITD1Q8WV92 249 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 MS4A10Q96PG2 267 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 PLEKHA3Q9HB20 300 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 TMEM14BQ9NUH8 114 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 CACFD1Q9UGQ2 172 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 ZNF257Q9Y2Q1 563 aa6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 NIPBLQ6KC79 2804 aaeCLIP6.45□□□□□ -1.38
LIMCH1-206ENST00000505705 A0A1W2PRX2 142 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 SNRPGP15A8MWD9 76 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 TEX22C9J3V5 150 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 CYB5BO43169 146 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 SCGB1D2O95969 90 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 ELANEP08246 267 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 PPIFP30405 207 aaKnown RBP6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 SNCAP37840 140 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 RAB9AP51151 201 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 CRIP2P52943 208 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 TPPP2P59282 170 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 SPCS3P61009 180 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 SSBP2P81877 361 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 SRSF4Q08170 494 aaKnown RBP6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 TATDN3Q17R31 274 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 NSUN5P1Q3KNT7 163 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 SHISA2Q6UWI4 295 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 GSG1LQ6UXU4 331 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 Q6ZRM9 215 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 HSD17B13Q7Z5P4 300 aaPredicted RBP6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 TTC9CQ8N5M4 171 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 MINDY2Q8NBR6 621 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 OR10W1Q8NGF6 305 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 WFDC12Q8WWY7 111 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 ZNF747Q9BV97 191 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 HIPK2Q9H2X6 1198 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 NDUFA4L2Q9NRX3 87 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 GSKIPQ9P0R6 139 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 ZNF580Q9UK33 172 aa6.44□□□□□ -1.38
LIMCH1-206ENST00000505705 NUDT19A8MXV4 375 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 WRBO00258 174 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 CCSO14618 274 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 GOSR2O14653 212 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 MED6O75586 246 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 IGHG4P01861 327 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 PRH1P02810 166 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 TRGV3P03979 118 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 RPLP1P05386 114 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 P0C879 139 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 AREGP15514 252 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 PSMB6P28072 239 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 SUB1P53999 127 aaKnown RBP eCLIP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 FOXE3Q13461 319 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 IAH1Q2TAA2 248 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 NMSQ5H8A3 153 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 ASPHD1Q5U4P2 390 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 HIST2H2BDQ6DRA6 164 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 SLC25A24Q6NUK1 477 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 LCNL1Q6ZST4 164 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 OR52E5Q8NH55 327 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 FAM110DQ8TAY7 271 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 SRSF8Q9BRL6 282 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 SLA2Q9H6Q3 261 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 HEYLQ9NQ87 328 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 THYN1Q9P016 225 aa6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 TSSC4Q9Y5U2 329 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-206ENST00000505705 A0A0G2JLM5 398 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 A0A1B0GW64 132 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 CGB1A6NKQ9 187 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 NPIPB5A8MRT5 1133 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 MPTX1A8MV57 137 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 H3BUA1 57 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 SLC25A6P12236 298 aa6.42□□□□□ -1.38
LIMCH1-206ENST00000505705 HIST1H1BP16401 226 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms