RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 FBXO7Q9Y3I1 522 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 LINC01619G3V211 115 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 UPK2O00526 184 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 SOX15O60248 233 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 S1PR2O95136 353 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 BRI3O95415 125 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 CA2P00918 260 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 HLA-GP17693 338 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 CCR6P51684 374 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 TMED4Q7Z7H5 227 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 VKORC1L1Q8N0U8 176 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 LGI3Q8N145 548 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 LFNGQ8NES3 379 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 OR4A16Q8NH70 328 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 RBPMSQ93062 196 aaKnown RBP9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 SEC22AQ96IW7 307 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 MS4A10Q96PG2 267 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 TP53RKQ96S44 253 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 ZNF430Q9H8G1 570 aaPredicted RBP9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 PALMDQ9NP74 551 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 ZNF355PQ9NSJ1 428 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 TMEM140Q9NV12 185 aa9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 LSM4Q9Y4Z0 139 aaKnown RBP9.61□□□□□ -0.87
PDGFRA-204ENST00000504461 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 MSGN1A6NI15 193 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 SAP30O75446 220 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 TCRBP04435 133 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 LGALS1P09382 135 aaKnown RBP9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 EGR2P11161 476 aaPredicted RBP9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 TPPP2P59282 170 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 TNXAQ16473 311 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 SP6Q3SY56 376 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 ASPHD1Q5U4P2 390 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 SSX9Q7RTT3 188 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 LRTM2Q8N967 370 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 ADAD2Q8NCV1 583 aaKnown RBP9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 DUSP18Q8NEJ0 188 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 OR5B3Q8NH48 314 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 LSM10Q969L4 123 aaKnown RBP9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 SLA2Q9H6Q3 261 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 ZNF257Q9Y2Q1 563 aa9.6□□□□□ -0.87
PDGFRA-204ENST00000504461 A0A0B4J2A0 478 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 H3BUA1 57 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 CYB5BO43169 146 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 SFT2D2O95562 160 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 DHFRP00374 187 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 TRGV3P03979 118 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 HSPB1P04792 205 aaKnown RBP9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 BTCP35070 178 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 G6PCP35575 357 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 AKR1C2P52895 323 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 SLURP1P55000 103 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 PJVKQ0ZLH3 352 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 TMEM187Q14656 261 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 OR1L8Q8NGR8 309 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 RNASE11Q8TAA1 199 aaKnown RBP9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 GRPEL2Q8TAA5 225 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 ENKURQ8TC29 256 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 PHB2Q99623 299 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 SHPKQ9UHJ6 478 aa9.59□□□□□ -0.87
PDGFRA-204ENST00000504461 SORL1Q92673 2214 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 IGHV4OR15-8A0A075B7B6 117 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 A0A087WW49 117 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 ARPC1BO15143 372 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 RBMXL2O75526 392 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 OR4E1P0C645 316 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 VAMP1P23763 118 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 RPL27AP46776 148 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 MECP2P51608 486 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 SUPT4H1P63272 117 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 MRGPRG-AS1Q2M3A8 158 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 C4orf46Q504U0 113 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 TMEM268Q5VZI3 342 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 SELENOHQ8IZQ5 122 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 OR5T1Q8NG75 326 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 SRSF12Q8WXF0 261 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 TMEM230Q96A57 120 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 QTRT1Q9BXR0 403 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 TMEM14BQ9NUH8 114 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 TBC1D24Q9ULP9 559 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 TMED3Q9Y3Q3 217 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 SMAD5-AS1Q9Y6J3 95 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 U3KQK5 164 aa9.58□□□□□ -0.88
PDGFRA-204ENST00000504461 C13orf42A0A1B0GVH6 325 aa9.57□□□□□ -0.88
PDGFRA-204ENST00000504461 C9orf170A2RU37 121 aa9.57□□□□□ -0.88
PDGFRA-204ENST00000504461 IGKV1-39P01597 117 aa9.57□□□□□ -0.88
PDGFRA-204ENST00000504461 IGKV1D-39P04432 117 aa9.57□□□□□ -0.88
PDGFRA-204ENST00000504461 H2AFB2P0C5Z0 115 aa9.57□□□□□ -0.88
PDGFRA-204ENST00000504461 TRAPPC2P0DI81 140 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms